GrainGenes Marker Report: BCD115B
Locus
BCD115B
Type
RFLP
Chromosome
3A 3B 3D
Chromosome Arm
3AL 3BL 3DL
Map
Oat-2001-KxO_22 92 Oat-2009-KxO_22_44_18 74 Oat-2016-Consensus-20 196.3 Oat-2018-Consensus_Mrg20 196.3 Oat-KxO/2003-22_44+18 66.2
[ Show Nearby Loci ]
Map Data
Oat, KxO, 2003
[ Show all 6 ]
Species
Avena sativa
Probe
BCD115
Homology
AAB88617.1 e-value: 4e-53 (AF034946) ubiquitin conjugating enzyme [Zea mays] UBC4_LYCES e-value: 0.079 UBIQUITIN-CONJUGATING ENZYME E2-17 KD (UBIQUITIN-PROTEIN LIGASE) (UBIQUITIN CARRIER PROTEIN) T01354 e-value: 5e-19 herbicide safener binding protein 1 - maize T01354 e-value: 5e-23 herbicide safener binding protein 1 - maize
Remark
Marker placement value = 3.61 cM on map Oat-KxO/2003-22_44+18 Marker is not a framework marker on map Oat-KxO/2003-22_44+18
Possible Orthologs
BCD115
[ Show all 15 ]
Probe for Locus
BCD115
Locus
Xbcd115-3D
[ Show all 23 ]
Reference
Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Lambda ZAP II library Bar.LambZAPII [c]
Type
cDNA
Sequence
BE438608
[ Show all 9 ]
Polymorphism
BCD115 EcoRI BCD115 EcoRV BCD115 DraI BCD115 HindIII
Linkage Group
1L, 3L
Insert Enzyme
EcoRI
Source Species
Hordeum vulgare
Source Germplasm
Willis
Source Tissue
etiolated leaf
Insert Size
0.9
PCR size
0.9
GrainGenes Marker Report: BCD115B
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