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GrainGenes Marker Report: AWBMS54

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Locus
AWBMS54
Type
Microsatellite
Chromosome
5H
7H
Map
Barley-consensus-2003-5H26.5
Hordeum-Consensus2006-DArT-7H83.6
[ Show Nearby Loci ]
Map Data
Barley consensus 2003
Barley, Consensus 2006, DArT
Probe
AWBMS54
Reference
ReferenceWenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
Data Source
Langridge, Peter J.
Remark
Number of populations contributing to the placement of AWBMS54 in the Barley, Consensus 2006 DArT maps = 1



Probe
AWBMS54
Locus
AWBMS0054
AWBMS54
Reference
ReferenceHayden MJ et al. (2008) Multiplex-Ready PCR: A new method for multiplexed SSR and SNP genotyping BMC Genomics 9:80.
ReferenceHearnden PR et al. (2007) A genetic map of 1,000 SSR and DArT markers in a wide barley cross. Theoretical and Applied Genetics 115:383-391.
ReferenceKarakousis A et al. (2003) A consensus map of barley integrating SSR, RFLP, and AFLP markers Australian Journal of Agricultural Research 54:1173-1185.
Remarks
Adelaide Waite Barley Microsatellite
Type
PCR
SSR
PCR primers
F 5' GAGCGTGCAGTTTGTAAGTG
R 5' CGGCATGCTCCTCTACC
Forward GAGCGTGCAGTTTGTAAGTG
Reverse CGGCATGCTCCTCTACC
GAGCGTGCAGTTTGTAAGTG
CGGCATGCTCCTCTACC