GrainGenes Marker Report: AM7
Locus
am7
Type
Microsatellite
Synonym
Other name AM7 Synonym AM0007 AM7
Map Data
Oat, KxO, 2003
Species
Avena sativa
Probe
AM7
Remark
Marker placement value = 0.00 cM on the Oat-KxO/2003 maps Marker is unlinked on the Oat-KxO/2003 maps
Possible Orthologs
AM7 am7a am7b AM0007
Probe
AM7
Locus
am7 AM7 am7a am7b AM0007
Reference
Li CD et al. (2000) The development of oat microsatellite markers and their use in identifying relationships among Avena species and oat cultivars Theoretical and Applied Genetics 101:1259-1268.
Remarks
Insert contains repeat (AG)21 Known repeat = 5'-Alu with 75 % identity over 62 base pairs Polymorphic in Kanota/Ogle and Marion/Terra. Among 20 oat cultivars, 1 allele was found.
Type
PCR SSR
PCR primers
5'GTG AGC GCC GAA TAC ATA
5'TTG GCT AGC TGC TTG AAA CT
SSR size
156
Amplification Conditions
Average melting temperature (degrees C) = 48
Source Species
Avena sativa
Source Germplasm
Ogle (oat)
GrainGenes Marker Report: AM7
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