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GrainGenes Marker Report: AM41

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Locus	am41
Type	Microsatellite
Synonym	Other name AM41
Map	Oat-KxO/2003-3+38 77.9
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Map Data	Oat, KxO, 2003
Species	Avena sativa
Probe	AM41
Remark	Marker placement value = 11.80 cM on map Oat-KxO/2003-3+38 Marker is not a framework marker on map Oat-KxO/2003-3+38
Probe	AM41
Locus	am41 AM41
Reference	Li CD et al. (2000) The development of oat microsatellite markers and their use in identifying relationships among Avena species and oat cultivars Theoretical and Applied Genetics 101:1259-1268.
Remarks	Insert contains repeat (GAA)10 Among 20 oat cultivars, 2 alleles were found, polymorphic information content (PIC) = 0.1.
Type	PCR SSR
PCR primers	5'CCA AAG GAA ACA AGT CAA TAG 5'TTC CCG CAA AGT CAT CAT
SSR size	205
Amplification Conditions	Average melting temperature (degrees C) = 42
Source Species	Avena sativa
Source Germplasm	Ogle (oat)