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GrainGenes Marker Report: ABG461C

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Locus	ABG461C
Type	RFLP STS
Chromosome	2H
Map	Hordeum-Bins-2H 54 Hordeum-Consensus2006-DArT-2H 57.8 Hordeum-KxM-4H 6.5 Hv-Consensus2006-Marcel-2H 53.58 Hv-Integrated2009-2H 48.1
	[ Show Nearby Loci ]
Map Data	Barley, BinMap 2005 Barley, Consensus 2006, DArT Barley, Consensus 2006, Marcel Barley, Integrated, Marcel 2009 Barley, KxM
Probe	ABG461
Reference	Wenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
Data Source	Kleinhofs, Andris
Remark	Number of populations contributing to the placement of ABG461C in the Barley, Consensus 2006 DArT maps = 1 This marker is a Binlocus in the Hordeum-Bins maps, i.e. a marker mapped in other crosses and located to the Steptoe x Morex bin Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Oregon Wolfe Barleys Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Oregon Wolfe Dom x Rec
Possible Orthologs	ABG461 [ Show all 8 ]
Probe for Locus	ABG461
Locus	ABG461C [ Show all 9 ]
Synonym	Synonym HAR35_21952 HAR35_3657
External Databases	DDBJ EMBL GenBank
General Remarks	Shin Ebisu16 gDNA
Type	Genomic STS
PCR primers	TAG AAG TAG AAA AAG GAA CC GAA GAA CAA CCA ATA GAA TG
STS primers	5' AGTTCAATGTTCACCACAGC 5' CAATGTACCGGACTATTTGG
STS size	283
Amplification Conditions	STS annealing temperature 58-60 oC
Sequence	L44024 ABG461 ABG461-5 ABG461-3
Linkage Group	Group 1
Source Species	Hordeum vulgare
Insert Size	1