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GrainGenes Marker Report: ABC483

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Locus
ABC483
Type
RFLP
Synonym
SynonymABC483
Chromosome
5H
Chromosome Arm
5HS
Map
Barley-consensus-2003-5H3.6
[ Show all 23 ]
[ Show Nearby Loci ]
Map Data
Barley consensus
[ Show all 25 ]
Species
Hordeum vulgare
Probe
ABC483
Reference
ReferenceSzucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140.
ReferenceWenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
ReferenceRodriguez M et al. (2006) Integration of retrotransposons-based markers in a linkage map of barley. Molecular Breeding 17:173-184.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source
Langridge, Peter J.
Remark
Number of populations contributing to the placement of ABC483 in the Barley, Consensus 2006 DArT maps = 2
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Oregon Wolfe Barleys
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex; Oregon Wolfe Dom x Rec
Possible Orthologs
ABC483-5H



Probe
ABC483
Locus
ABC483
ABC483-5H
External Databases
DDBJ
EMBL
GenBank
Remarks
Steptoe malt cDNA
Type
cDNA
STS
PCR primers
TGC ATC ACC GAC GAC AGA CC
GGG CAC GAC GAC ACA CTC AG
Sequence
L43957
ABC483
ABC483-5
ABC483-3
Linkage Group
7S
Source Species
Hordeum vulgare
Insert Size
1