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GrainGenes Marker Report: ABC303

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Locus
ABC303
Type
RFLP
Synonym
SynonymABC303
Chromosome
4H
Chromosome Arm
4HS
Map
Barley-Consensus-4H-7
[ Show all 21 ]
[ Show Nearby Loci ]
QTL with Locus Marker
MetaQ.FHB_4H_4
Map Data
Barley consensus
[ Show all 21 ]
Species
Hordeum vulgare
Probe
ABC303
Reference
ReferenceSzucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140.
ReferenceVarshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091.
ReferenceWenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source
Blake, Tom05.04.19
Remark
Number of populations contributing to the placement of ABC303 in the Barley, Consensus 2006 DArT maps = 1
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Oregon Wolfe Barleys
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex; Oregon Wolfe Dom x Rec
Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs
ABC303-4H
Xabc303-2B
Xabc303-6B


Probe
ABC303
Locus
ABC303
Xabc303-2B
Xabc303-6B
ABC303-4H
External Databases
DDBJ
EMBL
GenBank
Type
cDNA
STS
PCR primers
CTTTACAGCGACGAGACCAG
GAGGCTGTTATTATCTTACC
Sequence
L43944
ABC303
Source Species
Hordeum vulgare