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GrainGenes Marker Report: ABC257

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Locus
ABC257
Type
RFLP
Synonym
SynonymABC257
Chromosome
1H
Chromosome Arm
1HL
Map
Barley-Consensus-1H75.3
[ Show all 19 ]
[ Show Nearby Loci ]
Map Data
Barley consensus
[ Show all 19 ]
Species
Hordeum vulgare
Probe
ABC257
Reference
ReferenceVarshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091.
ReferenceRodriguez M et al. (2006) Integration of retrotransposons-based markers in a linkage map of barley. Molecular Breeding 17:173-184.
ReferenceWenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
ReferenceLi JZ et al. (2003) Development and genetic mapping of 127 new microsatellite markers in barley Theoretical and Applied Genetics 107:1021-1027.
Data Source
Blake, Tom05.04.19
Remark
Number of populations contributing to the placement of ABC257 in the Barley, Consensus 2006 DArT maps = 2
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex
Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs
Xabc257


Probe
ABC257
Locus
ABC257
RI031O17
Xabc257
Synonym
SynonymHAR35_12802
HAR35_48951
External Databases
DDBJ
EMBL
GenBank
Type
cDNA
STS
PCR primers
TTCAACGAAAACTCTGTCCA
GACGCCAGAGCTAGCAAAGT
Sequence
L43941
ABC257
Source Species
Hordeum vulgare