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GrainGenes Marker Report: ABC166

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Locus	ABC166
Type	RFLP
Synonym	Synonym ABC166
Chromosome	3H
Chromosome Arm	3HL
Map	Barley-Consensus-3H 90.3 [ Show all 18 ]
	[ Show Nearby Loci ]
Map Data	Barley consensus [ Show all 18 ]
Species	Hordeum vulgare
Probe	ABC166
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582. Varshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091. Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source	Blake, Tom 05.04.19 Close, Timothy J.
Remark	Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex In the Bowman-BC x Calicuchima-sib maps, this locus was originally assigned to a second linkage group on 3H. The distance between ABG453 and ABG4 is an average of 31.2 in the 3 GrainGenes maps containing these loci, and the linkage groups were combined at a distance of 31.2 cM. Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs	ABC166-3H Xabc166 Xabc166-3
Probe	ABC166
Locus	Xabc166-3 ABC166 Xabc166 ABC166-3H
Synonym	Synonym HAR35_15195 HAR35_34929
External Databases	DDBJ EMBL GenBank
Remarks	Steptoe malt cDNA
Type	cDNA STS
PCR primers	GTC CGA GGG CCG CCC TAC AC CCT GAA TCA ACA ACC AAA TA
Sequence	L43933 ABC166 ABC166-5
Linkage Group	Group 3 3
Source Species	Hordeum vulgare
Source Germplasm	Steptoe (barley)
Source Tissue	malt
Insert Size	0.3