GrainGenes Marker Report: ABC164a
Locus
ABC164a
Type
RFLP
Chromosome
1H
Map
Barley-ConsensusFHB-1H 60.5 Hordeum-Consensus2006-DArT-1H 58.7 Hv-Consensus2006-Marcel-1H 61.01 Hv-Integrated2009-1H 60.2
[ Show Nearby Loci ]
Map Data
Barley, Consensus 2006, DArT Barley, Consensus 2006, Marcel Barley, Consensus 2023, FHB Barley, Integrated, Marcel 2009
Probe
ABC164
Reference
Wenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
Remark
Number of populations contributing to the placement of ABC164a in the Barley, Consensus 2006 DArT maps = 1 Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex
Possible Orthologs
ABC164
[ Show all 11 ]
Probe for Locus
ABC164
Locus
ABC164
[ Show all 17 ]
Synonym
Synonym HAR35_19975 HAR35_48990
External Databases
DDBJ EMBL GenBank
General Remarks
Steptoe malt cDNA
Type
cDNA STS
PCR primers
CGC ACA CCT CTC CCT CCT TC
ATG CCC ATC TTC TGC AAC TC
STS primers
5' CAAGAGCACAGGATGGCGACCGTCC
5' GAGGCAGCCCTGATGTAGTACCAGT
STS size
ca. 1000
Amplification Conditions
STS annealing temperature 52-55 oC
Sequence
L43931 ABC164 ABC164-5
Polymorphism
ABC164 EcoRI
Linkage Group
Group 5
Source Species
Hordeum vulgare
Insert Size
0.6
GrainGenes Marker Report: ABC164a
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