Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Locus Report: POPA3_1390

[Submit comment/correction][What is a locus?] A genetic locus is a specific position on a chromosome where a gene or genetic marker is located.

Locus	POPA3_1390  [ Marker Report ]
Type	SNP
Probe	HAR35_3506 i_12_31390
Synonym	Other name 12_31390 BOPA2_12_31390 Synonym 12_31390
Chromosome	5H
Chromosome Arm	5HS
Map	Barley, 2012 9KSNP 5H 44 Hordeum-OPA-2009-5H 50.27 Hordeum-OPA123-2008-5H 50.27 Hordeum-OPAConsensus-2011-5H 41.45
	[ Show Nearby Loci ]
Map Data	Barley, 2012 9KSNP Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus Barley, OPA123-2008, Consensus
Species	Hordeum vulgare
Sequence	HVVMRXALLhA0227P16
Reference	Comadran J et al. (2012) Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley Nature Genetics 44:1388-1392. Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Data Source	Close, Timothy J.
Remark	Marker name in barley Pilot OPA1 = 3_1390 [ Show all 13 ]

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.