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GrainGenes Locus Report: TraesCS5D01G211400.1

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Type
Gene
Probe
TraesCS5D01G211400
Chromosome
5D
Map Data
Wheat, 2018, IWGSC CS RefSeq v1.0  TraesCS5D01G211400
Species
Triticum aestivum
Reference
ReferenceIWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
Remark
BLAST Hit Accession: tr|M8AVN8|M8AVN8_AEGTA
Human Readable Description: HMG-Y-related protein A
Pfam IDs Description: PF00538: linker histone H1 and H5 family; PF02178: AT hook motif
InterPro IDs Description: IPR000116: High mobility group protein HMGA; IPR000637: HMG-I/HMG-Y, DNA-binding, conserved site; IPR005818: Linker histone H1/H5, domain H15; IPR011991: Winged helix-turn-helix DNA-binding domain; IPR017956: AT hook, DNA-binding motif
GO IDs Description via InterPro: GO:0000785 CC: chromatin; GO:0000786 CC: nucleosome; GO:0003677 MF: DNA binding; GO:0005634 CC: nucleus; GO:0006334 BP: nucleosome assembly; GO:0006355 BP: regulation of transcription, DNA-templated

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