GrainGenes Locus Report: TraesCS4D01G052200.1
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Type
Gene
Probe
TraesCS4D01G052200
Chromosome
4D
Map Data
Wheat, 2018, IWGSC CS RefSeq v1.0 TraesCS4D01G052200
Species
Triticum aestivum
Reference
IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
Remark
BLAST Hit Accession: tr|A0A096URM5|A0A096URM5_WHEAT Human Readable Description: Phytochrome Pfam IDs Description: PF08446: PAS fold; PF01590: GAF domain; PF00360: Phytochrome region; PF00989: PAS fold; PF00512: His Kinase A (phospho-acceptor) domain; PF02518: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase InterPro IDs Description: IPR000014: PAS domain; IPR001294: Phytochrome; IPR003018: GAF domain; IPR003594: Histidine kinase-like ATPase, C-terminal domain; IPR003661: Signal transduction histidine kinase, dimerisation/phosphoacceptor domain; IPR005467: Histidine kinase domain; IPR012129: Phytochrome A/B/C/D/E; IPR013515: Phytochrome, central region; IPR013654: PAS fold-2; IPR013767: PAS fold; IPR016132: Phytochrome chromophore attachment domain; IPR029016: GAF domain-like GO IDs Description via InterPro: GO:0000155 MF: phosphorelay sensor kinase activity; GO:0005515 MF: protein binding; GO:0006355 BP: regulation of transcription, DNA-templated; GO:0007165 BP: signal transduction; GO:0009584 BP: detection of visible light; GO:0009585 BP: red, far-red light phototransduction; GO:0009881 MF: photoreceptor activity; GO:0017006 BP: protein-tetrapyrrole linkage; GO:0018298 BP: protein-chromophore linkage; GO:0042803 MF: protein homodimerization activity
GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.
GrainGenes Locus Report: TraesCS4D01G052200.1
[Submit comment/correction][What is a locus?]
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GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture. | |||