The GrainGenes curation team is working toward a complete representation of the data in the Wheat Gene Catalogue (WGC) into the interactive SQL database at GrainGenes. Gene classes, genes, loci, maps, references and germplasm records are being updated and/or created as needed. Links to the Komugi database are added to gene class, gene, and allele records. All links below are to records in the GrainGenes SQL database unless otherwise noted.
This list will be edited often so check back frequently to follow along on this huge curation project at GrainGenes!
Gene classes are listed here in the order they are curated. Scroll down to see the newest additions.
Gross Morphology: Spike Characteristics data at Komugi
- Spelt gene class
- Q (Triticum) gene
- q (Triticum) gene
- Compactum gene class
- C (Triticum) gene, locus and map
- Cg (Triticum) gene
- Sphaerococcum gene class
- S-A1 (Triticum) gene
- S-A1a (Triticum) allele
- S-A1b (Triticum) allele
- S-B1 (Triticum) gene
- S-B1a (Triticum) allele
- S-B1b (Triticum) allele
- S-D1 (Triticum) gene
- S-D1a (Triticum) allele
- S-D1b (Triticum) allele
- S-D1c (Triticum) allele
- s2 (Triticum) gene
- S-A1 (Triticum) gene
- Branched Spike gene class
- bh-A1 (Triticum) gene
- bh-D1 (Triticum) gene, locus and map
- bh-R1 (Secale) gene
- Elongated glume gene class
- P1 (Triticum) gene
- P2 (Triticum) gene
- Spike (ear) length gene class
- QEl.ocs-5A.1 QTL
- Multi-gynoecium gene class
- Pis1 (Triticum) gene
Abscisic acid accumulation data at Komugi
- Abscisic acid-related gene class
- QABA.CSxSQ1-5A QTL
Alkylresorcinol content data at Komugi
- Alkylresorcinol gene class
- Ar1 (Triticum) gene
- ar1 (Triticum) gene
Aluminum tolerance data at Komugi
- Aluminum tolerance gene class
- Alt1 (Triticum) gene
- alt1 (Triticum) gene
- Alt2 (Triticum) gene
Anthocyanin pigmentation data at Komugi
- Anthocyanin pigmentation gene class
- Purple anthers gene class
- Pan1 (Triticum) gene
- Pan2 (Triticum) gene
- Purple auricles gene class
- An5 (Triticum) gene
- Pc/Pls/Plb (Triticum) gene
- Ra1 (Triticum) gene
- Ra2 (Triticum) gene
- Ra3 (Triticum) gene
- Red / purple coleoptiles gene class
- Rc-A1 (Triticum) gene
- Rc-A1a (Triticum) allele
- Rc-B1 (Triticum) gene
- Rc-B1a (Triticum) allele
- Rc-D1 (Triticum) gene
- Rc-D1a (Triticum) allele
- Rc-A1 (Triticum) gene
- Purple/red culm/straw/stem gene class
- Pc1 (Triticum) gene
- Pc2 (Triticum) gene
- Pc/Pls/Plb (Triticum) gene
- Purple grain/pericarp gene class
- Pp1 (Triticum) gene
- Pp2 (Triticum) gene
- Pp3 (Triticum) gene
- Pp3a (Triticum) allele
- Pp3b (Triticum) allele
- pp1pp3 (Triticum) gene
- Purple glumes gene class
- Pg (Triticum) gene
- Purple leaf blade gene class
- Plb (Triticum) gene
- Purple anthers gene class
Awnedness data at Komugi
- Awnedness gene class
Dominant inhibitors:- Hooded gene class
- Hd (Triticum) gene
- hd (Triticum) gene
- Tipped 1 gene class
- B1 gene
- B1a (Triticum) allele
- B1b (Triticum) allele
- B1c (Triticum) allele
- B1 gene
- Tipped 2 gene class
- B2 (Triticum) gene
- b2 (Triticum) gene
- Hooded gene class
Basal sterility in speltoids data at Komugi only.
Blue aleurone data at Komugi.
- Blue aleurone gene class
- Ba1 (Triticum) gene
- Ba2 (Triticum) gene
Brittle rachis data at Komugi
- Brittle rachis gene class
- Br-A1 (Triticum) gene
- Br-B1 (Triticum) gene
- Br-D1 (Triticum) gene
- Br-D2 (Triticum) gene
- Br-S1 (Triticum) gene
- Br4 (Triticum) gene
Brittle culm data at Komugi
- Brittle culm gene class
- brc1 (Triticum) gene
- brc2 (Triticum) gene
- brc3 (Triticum) gene
- brc5 (Triticum) gene (Note: brc5 is not yet published in the WGC)
Boron tolerance data at Komugi
- Boron tolerance gene class
- Bo1 (Triticum) gene
- Bo2 (Triticum) gene
- Bo3 (Triticum) gene
Cadmium uptake data at Komugi
- Cadmium uptake gene class
- Cdu1 (Triticum) gene
- cdu1 (Triticum) gene
Chlorophyll Abnormalities data at Komugi
- Chlorina gene class
- Cn-A1 (Triticum) gene
- Cn-A1a (Triticum) allele
- Cn-A1b (Triticum) allele
- Cn-A1c (Triticum) allele
- Cn-A1d (Triticum) allele
- Cn-B1 (Triticum) gene
- Cn-B1a (Triticum) allele
- Cn-B1b (Triticum) allele
- Cn-D1 (Triticum) gene
- Cn-D1a (Triticum) allele
- Cn-A1 (Triticum) gene
- Virescent gene class
- V1 (Triticum) gene
- v1a (Triticum) allele
- v1b (Triticum) allele
- V2 (Triticum) gene
- v2a (Triticum) allele
- v2b (Triticum) allele
- V3 (Triticum) gene
- V1 (Triticum) gene
Cleistogamous Flowering data at Komugi only.
Copper efficiency data at Komugi
- Copper efficiency gene class
- Ce (Triticum) gene
Pre-harvest Sprouting genes at Komugi
- Phs1 (Triticum) gene
- phs1 (Triticum) gene
- Phs (Triticum) gene
Germination Index genes at Komugi
- TaSdr-A1 (Triticum) gene
- TaSdr-A1a (Triticum) allele
- TaSdr-A1b (Triticum) allele
- TaSdr-B1 (Triticum) gene
- TaSdr-B1a (Triticum) allele
- TaSdr-B1b (Triticum) allele
Vivipary genes at Komugi
- Vp-A1 (Triticum) gene
- Vp-A1a (Triticum) allele
- Vp-A1b (Triticum) allele
- Vp-A1c (Triticum) allele
- Vp-A1d (Triticum) allele
- Vp-A1e (Triticum) allele
- Vp-A1f (Triticum) allele
- Vp-A1g (Triticum) allele
- Vp-A1h (Triticum) allele
- Vp-A1i (Triticum) allele
- Vp-B1 (Triticum) gene
- Vp-B1a (Triticum) allele
- Vp-B1b (Triticum) allele
- Vp-B1c (Triticum) allele
- Vp-B1d (Triticum) allele
- Vp-B1e (Triticum) allele
- Vp-B1f (Triticum) allele
- Vp-B1g (Triticum) allele
- Vp-1Be (Triticum) allele
- Vp-1Bf (Triticum) allele
- Vp-1Bg (Triticum) allele
- Vp-D1 (Triticum) gene
- Vp-D1a (Triticum) allele
- VP-1B (Triticum) gene
Earliness per se genes at Komugi
- Eps-A1a (Triticum) gene
- Eps-A1b (Triticum) gene
- Eps-1Am (Triticum) gene
- TaELF3 (Triticum) gene
- Eps-D1 (Triticum) gene
- Eps (Triticum) gene
- EpsWi (Triticum) allele
- epsCnn (Triticum) allele
- Eps-5BL.1 QTL
- Eps-5BL.2 QTL
Frost resistance genes at Komugi
- Fr1 (Triticum) gene
- Fr2 (Triticum) gene
- Fr-A2 (Triticum) gene
- Fr-B2 (Triticum) gene
Vernalization geneclass at Komugi
- Response to vernalization (Triticum) gene class
- Vrn1 (Triticum) gene
- Vrn1 (Triticum) allele
- vrn1 (Triticum) allele
- Vrn-A1 (Triticum) gene
- vrn-A1 (Triticum) allele
- Vrn-A1a (Triticum) allele
- vrn-A1a (Triticum) allele
- vrn-A1a (Triticum) allele
- Vrn-A1b (Triticum) allele
- vrn-A1b (Triticum) allele
- Vrn-A1c (Triticum) allele
- vrn-A1c (Triticum) allele
- Vrn-A1d (Triticum) allele
- Vrn-A1e (Triticum) allele
- Vrn-A1v (Triticum) allele
- vrn-A1w (Triticum) allele
- Vrn-B1 (Triticum) gene
- Vrn-B1a (Triticum) allele
- Vrn-B1b (Triticum) allele
- Vrn-B1c (Triticum) allele
- Vrn-B1d (Triticum) allele
- Vrn-D1 (Triticum) gene
- Vrn-D1a (Triticum) allele
- Vrn-D1b (Triticum) allele
- Vrn2 (Triticum) gene
- Vrn2 (Triticum) allele
- vrn2 (Triticum) allele
- Vrn-A2a (Triticum) allele
- Vrn-A2b (Triticum) allele
- Vrn-A2c (Triticum) allele
- Vrn-B2 (Triticum) gene
- Vrn-D2 (Triticum) gene
- Vrn3 (Triticum) gene
- Vrn3 (Triticum) allele
- vrn3 (Triticum) allele
- Vrn-B3 (Triticum) gene
- vrn-B3 (Triticum) allele
- Vrn4 (Triticum) gene
- Vrn4 (Triticum) allele
- vrn4 (Triticum) allele
- Vrn5 (Triticum) gene
- Gametocidal Activity gene class
- Gc1 (Triticum) gene
- Gc1a (Triticum) gene
- Gc1-B1a (Aegilops) gene
- Gc1b (Triticum) gene
- Gc1-B1b (Aegilops) gene
- Gc1-C1 (Aegilops) gene
- Gc1-Sl1 (Aegilops) gene
- Gc-S13 (Aegilops) gene
- Gc2-Sl1a (Aegilops) gene
- Gc2-Sl1b (Aegilops) gene
- Gc3-C1 (Aegilops) gene
- Gc-C (Aegilops) gene
- Sd1 (Lophopyrum) gene
- Sd2 (Lophopyrum) gene
- Suppression of gametocidal genes gene class
- Igc1 (Triticum) gene
- igc1 (Triticum) allele
- Gibberellic Acid Response (insensitivity) Genes at Komugi
- Gai1 (Triticum) gene
- Gai2 (Triticum) gene
- Gai3 (Triticum) gene
- Rht1 (Triticum) gene
- Rht-1 gene
- Rht2 (Triticum) gene
- Rht2 gene
- Rht-A1a (Triticum) gene
- Rht-B1 (Triticum) gene
- Rht-B1a (Triticum) allele
- Rht-B1b (Triticum) allele
- Rht-B1c (Triticum) allele
- Rht-B1d (Triticum) allele
- Rht-B1e (Triticum) allele
- Rht-B1f (Triticum) allele
- Rht-B1g (Triticum) allele
- Rht-B1_IC2196 (Triticum) allele
- Rht-D1 (Triticum) gene
- Rht-D1a (Triticum) allele
- Rht-D1b (Triticum) allele
- Rht-D1c (Triticum) allele
- Rht-D1d (Triticum) allele
GA-Sensitive Genes and Alleles
Reduced Height: GA-Sensitive genes at Komugi- Rht3 (Triticum) gene
- Rht4 (Triticum) gene
- Rht5 (Triticum) gene
- Rht6 (Triticum) gene
- Rht7 (Triticum) gene
- Rht8 (Triticum) gene
- Rht8a (Triticum) allele
- Rhtt8b (Triticum) allele
- Rht8c (Triticum) allele
- Rht8d (Triticum) allele
- Rht8e (Triticum) allele
- Rht8f (Triticum) allele
- Rht8g (Triticum) allele
- Rht8h (Triticum) allele
- Rht9 (Triticum) gene
- Rht10 (Triticum) gene
- Rht11 (Triticum) gene
- Rht12 (Triticum) gene
- Rht13 (Triticum) gene
- Rht14 (Triticum) gene
- Rht15 (Triticum) gene
- Rht16 (Triticum) gene
- Rht17 (Triticum) gene
- Rht18 (Triticum) gene
- Rht19 (Triticum) gene
- Rht20 (Triticum) gene
- Rht21 (Triticum) gene
- Rht22 (Triticum) gene
- Rht23 (Triticum) gene
- Rht24 (Triticum) gene
- Rht25 (Triticum) gene
- Rht_NM9 (Triticum) gene
Reduced Height QTLs
- QHt.inra-4A
- QHt.inra-6D
- QHt.inra-7A
- QHt.riso-3A
- QHt.fcu-4BL
- QHt.fcu-6AS
- QHt.crc-2D
- QHt.crc-4B
- QHt.crc-4D
- QHt.crc-5B
- QHt.crc-7A
- QHt.crc-7B
- QHt.fra-1A
- QHt.fra-1B
- QHt.fra-4B
- QHt.fra-7A
- QHt.inra-2B
- QHt.inra-5A
- QHt.ipk-4A
- QHt.ipk-6A
- QHt.ocs-4A.1
- QHt.ocs-4A.2
- QHt.ocs-5A.1
- QHt.fra-7B
- QHt.nau-2D
Glaucousness Genes and Alleles:
Link to Glaucousness genes at Komugi- W1 (Triticum) gene
- W2 (Triticum) gene
- W3 (Triticum) gene
- W4 (Triticum) gene
- w1w2 (Triticum) gene
- Iw1 (Triticum) gene
- Iw2 (Triticum) gene
- Iw3(Triticum) gene
- W1 (Triticum) allele
- w1 (Triticum) allele
- W1^I^ (Triticum) allele
- W2a (Triticum) allele
- W2b (Triticum) allele
- W2^I^ (Triticum) allele
- w3 (Triticum) allele
- w4 (Triticum) allele
- Ws (Triticum) gene
- ws (Triticum) allele
- Rg1 (Triticum) gene
- Rg2 (Triticum) gene
- Rg3 (Triticum) gene
- Rg-A1 (Triticum) gene
- Rg-A1a (Triticum) allele
- Rg-A1b (Triticum) allele
- Rg-A1c (Triticum) allele
- Rg-A1d (Triticum) allele
- Rg-B1 (Triticum) gene
- Rg-B1a (Triticum) allele
- Rg-B1b (Triticum) allele
- Rg-D1 (Triticum) gene
- Rg-D1a (Triticum) allele
- Rg-D1b (Triticum) allele
- Rg-D1c (Triticum) allele
- QRg.ipk-1D QTL
- Bg (Triticum) gene
- bg (Triticum) allele
- Bga (Triticum) allele
- Bgb (Triticum) allele
- Pbc (Triticum) gene
- cc (Triticum) gene
- Bla1 (Triticum) gene
- QRaw.ipk-1A QTL
- QRaw.ipk-1D QTL
Gametocidal Activity Genes at Komugi
Suppression of gametocidal gene class at Komugi
Gibberellic acid insensitivity gene class at GrainGenes
GA-Insensitive Genes and Alleles
Reduced Height: GA-Insensitive genes at Komugi
Inhibitor of glume pigment Gene Class