The GrainGenes Genome Browsers

Search Genome Browsers

Examples: TraesCS1A01G104700, HORVU.MOREX.r3.1HG0033540, TraesLDM1A01G199200.1

Popular Browsers

Wheat Chinese Spring IWGSC RefSeq v2.1 genome assembly (2021)

Wheat Chinese Spring IWGSC RefSeq v1.0 genome assembly (2018)

Barley Morex V3 (2021)

Rye Lo7 pseudomolecules, Rabanus-Wallace et al. (2021)

PanGenomes

GrainGenes PanGenome Resources

Einkorn Resource (2 cultivars)
(JBrowse2, Synteny)

Aegilops tauschii Resource (4 cultivars)
(JBrowse2, Synteny)

Wheat PanGenome (38 cultivars)
(JBrowse2, Synteny)

Wheat Pangenome (17 assemblies)
Jiao et al. 2024 ⏵

Barley Pangenome v2 (76 assemblies)
Jayakodi et al. 2024 ⏵

Wheat einkorn (2 assemblies)
Ahmed et al. 2023 ⏵

Aegilops (3 assemblies)
Avni et al. 2022 ⏵

Avena (3 assemblies)
Peng et al. 2022 ⏵

Avena (3 assemblies)
Kamal et al. 2022 ⏵

Aegilops tauschii (4 assemblies)
Zhou et al. 2021 ⏵

Barley Pangenome v1 (19 assemblies)
Jayakodi et al. 2020 ⏵

10+ Wheat Pangenome Project
Walkowiak et al (2020) ⏵

Avena; Diploid Oat (2 assemblies)
Maughan et al. 2019 ⏵

Wheat

Aegilops mutica Genome Assembly, Grewal et al. (2025)

Wheat Cultivar Chuanmai 104 Genome Assembly, Liu et al. (2024)

Triticum timopheevii Genome Assembly, Grewal et al. (2024)

Triticum turgidum var Kronos, Seong et al. (2023)

Aegilops umbellulata genome assembly; Abrouk et al. (2023)

Wheat cultivar Sonmez genome assembly Akpinar et al. (2022)

Wheat cultivar Renan genome assembly; Aury et al. (2022)

Wheat cultivar Attraktion genome assembly; Kale et al. (2022)

Wheat Kariega genome assembly; Athiyannan et al. (2022)

Wheat Fielder genome assembly; Sato et al. (2021)

Aegilops tauschii Aet v5.0 genome assembly; Wang et al. (2021)

Wheat Chinese Spring IWGSC RefSeq v2.1 genome assembly (2021)

Triticum turgidum Durum Wheat Svevo Rel. 1.0 (2019)

Wild Emmer Wheat Zavitan WEWSeq v2.0 genome assembly (2019)

Wheat Chinese Spring IWGSC RefSeq v1.0 genome assembly (2018)

Triticum urartu genome assembly (2018)

Aegilops tauschii Aet v4.0 genome assembly (2017)

Wild Emmer Wheat Zavitan WEWSeq v1.0 genome assembly (2017)

Hexaploid Wheat Pangenome, Montenegro et al. (2017)

Barley

Barley Morex V3 (2021)

Barley MorexV2 assembled by TRITEX (2019)

Barley MorexV1, IBSCv2 genome assembly (2017)

Oat

PepsiCo OT3098 v2 Hexaploid Oat (2021)

Avena strigosa S75 Oat; Li et al. (2021)

PepsiCo OT3098 Hexaploid Oat (2020)

Rye

Rye Weining v1 pseudomolecules, Li et al. (2021)

Rye Lo7 pseudomolecules, Rabanus-Wallace et al. (2021)

Rye select Lo7, Bauer et al. (2017)

Other Genome Sequences and Older Browsers