Three new tracks have been added to the IWGSC Chinese Spring v1 genome browser aligning QTL and significant markers for salinity, pathology, and agronomic traits.

All QTL have records in the GrainGenes Database with reciprocal links to and from the browser.

Please see individual papers for QTL statistics and additional information.

Salinity Tolerance Traits

• 16 QTL from Quamruzzaman et al. (2022) Genome-wide association study reveals a genomic region on 5AL for salinity tolerance in wheat. TAG 135:709-722 https://doi.org/10.1007/s00122-021-03996-8
• 92 QTL from Alotaibi et al. (2022) Identification of Genomic Regions Associated with Agronomical Traits of Bread Wheat Under Two Levels of Salinity Using GWAS. Plant Mol Biol Rep 2022 https://doi.org/10.1007/s11105-022-01341-x
• 26 QTL from Quan et al. (2021) Genome-Wide Association Study Uncover the Genetic Architecture of Salt Tolerance-Related Traits in Common Wheat (Triticum aestivum L.). Front Gen 12:66392. http://doi.org/10.3389/fgene.2021.663941
• 42 QTL from Chaurasia et al. (2020) Multi-locus genome-wide association studies reveal novel genomic regions associated with vegetative stage salt tolerance in bread wheat (Triticum aestivum L.). Genomics 112:4608-4621 https://doi.org/10.1016/j.ygeno.2020.08.006

Resistance Traits

• 26 QTL from Lhamo et al. (2023) Genome-wide association analyses of leaf rust resistance in cultivated emmer wheat. TAG 136:20 https://doi.org/10.1007/s00122-023-04281-6
• 82 QTL from Nannuru et al. (2022) Genetic architecture of fusarium head blight disease resistance and associated traits in Nordic spring wheat. TAG 135:2247-2263 https://doi.org/10.1007/s00122-022-04109-9
• 46 QTL from Jambuthenne et al. (2022) Mining the Vavilov wheat diversity panel for new sources of adult plant resistance to stripe rust. TAG 135:1355-1373 https://doi.org/10.1007/s00122-022-04037-8
• 30 QTL from Serajazari et al. (2023) Identification of fusarium head blight resistance markers in a genome-wide association study of CIMMYT spring synthetic hexaploid derived wheat lines. BMC Plant Biology 23:290 https://doi.org/10.1186/s12870-023-04306-8
• 20 QTL from Lin et al. (2022) Genome-wide association mapping of septoria nodorum blotch resistance in Nordic winter and spring wheat collections. TAG 135:4169-4182 https://doi.org/10.1007/s00122-022-04210-z
• 124 QTL from Baranwal et al. (2022) Identification of genomic regions conferring rust resistance and enhanced mineral accumulation in a HarvestPlus Association Mapping Panel of wheat. TAG 135:865-882 https://doi.org/10.1007/s00122-021-04003-w
• 67 QTL from Zhang et al. (2021) Genome-wide association mapping of leaf rust and stripe rust resistance in wheat accessions using the 90K SNP arrays. TAG 134:1233-1351 https://doi.org/10.1007/s00122-021-03769-3
• 34 QTL from Rollar et al. (2021) QTL mapping of adult plant and seedling resistance to leaf rust (Puccinia triticina Eriks.) in a multiparent advanced generation intercross (MAGIC) wheat population. TAG 134:37-51 https://doi.org/10.1007/s00122-020-03657-2
• 44 QTL from Naruoka et al. (2015) Genome-wide association mapping for stripe rust (Puccinia striiformis F. sp. tritici) in US Pacific Northwest winter wheat (Triticum aestivum L.). TAG 128:1083-1101 http://doi.org/10.3389/fgene.2021.663941

Agronomic Traits

• 30 QTL from Serajazari et al. (2023) Identification of fusarium head blight resistance markers in a genome-wide association study of CIMMYT spring synthetic hexaploid derived wheat lines. BMC Genomics 23:290 https://doi.org/10.1186/s12870-023-04306-8
• 26 QTL from Lhamo et al. (2023) Genome-wide association analyses of leaf rust resistance in cultivated emmer wheat. TAG-136:20 https://doi.org/10.1007/s00122-023-04281-6
• 20 QTL from Lin et al. (2022) Genome-wide association mapping of septoria nodorum blotch resistance in Nordic winter and spring wheat collections. TAG 135:4169-4182
• 82 QTL from Nannuru et al. (2022) Genetic architecture of fusarium head blight disease resistance and associated traits in Nordic spring wheat. TAG 135:2247-2263 https://doi.org/10.1007/s00122-022-04109-9
• 46 QTL from Jambuthenne et al. (2022) Mining the Vavilov wheat diversity panel for new sources of adult plant resistance to stripe rust. TAG 135:1355-1373 https://doi.org/10.1007/s00122-022-04037-8
• 181 QTL from Semagn et al. (2022) Genome-wide association mapping of agronomic traits and grain characteristics in spring wheat under conventional and organic management systems. Crop Science 62:1069 doi.org/10.1002/csc2.20739.
• 18 QTL from Wang et al. (2021) Genome-wide association study identifies QTL for thousand grain weight in winter wheat under normal- and late-sown stressed environments. TAG 134:143-157 https://doi.org/10.1007/s00122-020-03687-w
• 9 QTL from Beyer et al. (2019) Loci and candidate genes controlling root traits in wheat seedlings - a wheat root GWAS. FIG 19, 91-107, https://doi.org/10.1007/s10142-018-0630-z
• 57 QTL from Godoy et al. (2018) Genome-wide Association Study of Agronomic Traits in a Spring-Planted North American Elite Hard Red Spring Wheat Panel. Crop Sci. 58:1838-1852. https://doi.org/10.2135/cropsci2017.07.0423
• 90 QTL from Turuspekov et al. (2017) GWAS for plant growth stages and yield components in spring wheat (Triticum aestivum L.) harvested in three regions of Kazakhstan. BMC Plant Biology 17:190. https://doi.org/10.1186/s12870-017-1131-2
• 31 QTL from Sukumaran et al. (2014) Genome-wide association study for grain yield and related traits in an elite spring wheat population grown in temperate irrigated environments. TAG-134:3530363 https://doi.org/10.1007/s00122-014-2435-3