Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: TraesCS5D01G449600

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS5D01G449600
Locus	TraesCS5D01G449600.2
URL	[ Hide all but 1 of 18 ] Pfam PF01336 Pfam PF00152 InterPro IPR002313 InterPro IPR004364 InterPro IPR004365 InterPro IPR006195 InterPro IPR012340 InterPro IPR018149 InterPro IPR034762 Gene Ontology GO:0000166 Gene Ontology GO:0003676 Gene Ontology GO:0004812 Gene Ontology GO:0004824 Gene Ontology GO:0005524 Gene Ontology GO:0005737 Gene Ontology GO:0006418 Gene Ontology GO:0006430 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A1D5ZJY6|A0A1D5ZJY6_WHEAT Human Readable Description: Lysine--tRNA ligase Pfam IDs Description: PF01336: OB-fold nucleic acid binding domain; PF00152: tRNA synthetases class II (D, K and N) InterPro IDs Description: IPR002313: Lysine-tRNA ligase, class II; IPR004364: Aminoacyl-tRNA synthetase, class II (D/K/N); IPR004365: OB-fold nucleic acid binding domain, AA-tRNA synthetase-type; IPR006195: Aminoacyl-tRNA synthetase, class II; IPR012340: Nucleic acid-binding, OB-fold; IPR018149: Lysyl-tRNA synthetase, class II, C-terminal; IPR034762: Bacterial/eukaryotic lysine-tRNA ligase, class II GO IDs Description via InterPro: GO:0000166 MF: nucleotide binding; GO:0003676 MF: nucleic acid binding; GO:0004812 MF: aminoacyl-tRNA ligase activity; GO:0004824 MF: lysine-tRNA ligase activity; GO:0005524 MF: ATP binding; GO:0005737 CC: cytoplasm; GO:0006418 BP: tRNA aminoacylation for protein translation; GO:0006430 BP: lysyl-tRNA aminoacylation
Type	Genomic
Sequence	TraesCS5D01G449600.1 TraesCS5D01G449600.2
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring