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GrainGenes Probe Report: TraesCS5D01G217500

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS5D01G217500
Locus	TraesCS5D01G217500.1
URL	[ Hide all but 1 of 12 ] Pfam PF01171 Pfam PF16503 InterPro IPR000541 InterPro IPR011063 InterPro IPR012089 InterPro IPR014729 InterPro IPR032442 Gene Ontology GO:0000049 Gene Ontology GO:0002098 Gene Ontology GO:0008033 Gene Ontology GO:0034227 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|T2DND8|T2DND8_PHAVU Human Readable Description: Cytoplasmic tRNA 2-thiolation protein Pfam IDs Description: PF01171: PP-loop family; PF16503: Zinc-ribbon InterPro IDs Description: IPR000541: Cytoplasmic tRNA 2-thiolation protein 1; IPR011063: tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal; IPR012089: 2-thiocytidine tRNA biosynthesis protein, TtcA; IPR014729: Rossmann-like alpha/beta/alpha sandwich fold; IPR032442: Cytoplasmic tRNA 2-thiolation protein 1, C-terminal GO IDs Description via InterPro: GO:0000049 MF: tRNA binding; GO:0002098 BP: tRNA wobble uridine modification; GO:0008033 BP: tRNA processing; GO:0034227 BP: tRNA thio-modification
Type	Genomic
Sequence	TraesCS5D01G217500.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring