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GrainGenes Probe Report: TraesCS5D01G070900

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
TraesCS5D01G070900
Locus
TraesCS5D01G070900.1
URL
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Pfam PF04055
Pfam PF13353
Pfam PF06463
InterPro IPR000385
InterPro IPR006638
InterPro IPR007197
InterPro IPR010505
InterPro IPR013483
InterPro IPR013785
Gene Ontology GO:0003824
Gene Ontology GO:0006777
Gene Ontology GO:0019008
Gene Ontology GO:0046872
Gene Ontology GO:0051536
Gene Ontology GO:0051539
Gene expression at wheat-expression.com (expVIP)
Reference
ReferenceIWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks
BLAST Hit Accession: sp|Q0AVU6|MOAA_SYNWW
Human Readable Description: GTP 3', 8-cyclase
Pfam IDs Description: PF04055: Radical SAM superfamily; PF13353: 4Fe-4S single cluster domain; PF06463: Molybdenum Cofactor Synthesis C
InterPro IDs Description: IPR000385: MoaA/nifB/pqqE, iron-sulphur binding, conserved site; IPR006638: Elongator protein 3/MiaB/NifB; IPR007197: Radical SAM; IPR010505: Molybdenum cofactor synthesis C-terminal; IPR013483: Molybdenum cofactor biosynthesis protein A; IPR013785: Aldolase-type TIM barrel
GO IDs Description via InterPro: GO:0003824 MF: catalytic activity; GO:0006777 BP: Mo-molybdopterin cofactor biosynthetic process; GO:0019008 CC: molybdopterin synthase complex; GO:0046872 MF: metal ion binding; GO:0051536 MF: iron-sulfur cluster binding; GO:0051539 MF: 4 iron, 4 sulfur cluster binding
Type
Genomic
Sequence
TraesCS5D01G070900.1
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring