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GrainGenes Probe Report: TraesCS5D01G013400

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS5D01G013400
Locus	TraesCS5D01G013400.1
URL	[ Hide all but 1 of 14 ] Pfam PF01477 Pfam PF00305 InterPro IPR001024 InterPro IPR001246 InterPro IPR013819 InterPro IPR020833 InterPro IPR020834 InterPro IPR027433 Gene Ontology GO:0005515 Gene Ontology GO:0016491 Gene Ontology GO:0016702 Gene Ontology GO:0046872 Gene Ontology GO:0055114 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|M8AW62|M8AW62_AEGTA Human Readable Description: Lipoxygenase Pfam IDs Description: PF01477: PLAT/LH2 domain; PF00305: Lipoxygenase InterPro IDs Description: IPR001024: PLAT/LH2 domain; IPR001246: Lipoxygenase, plant; IPR013819: Lipoxygenase, C-terminal; IPR020833: Lipoxygenase, iron binding site; IPR020834: Lipoxygenase, conserved site; IPR027433: Lipoxygenase, domain 3 GO IDs Description via InterPro: GO:0005515 MF: protein binding; GO:0016491 MF: oxidoreductase activity; GO:0016702 MF: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; GO:0046872 MF: metal ion binding; GO:0055114 BP: oxidation-reduction process
Type	Genomic
Sequence	TraesCS5D01G013400.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring