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GrainGenes Probe Report: TraesCS5A01G557300

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS5A01G557300
Locus	TraesCS5A01G557300.1
URL	[ Hide all but 1 of 20 ] Pfam PF01602 Pfam PF02883 Pfam PF02296 InterPro IPR002553 InterPro IPR003164 InterPro IPR008152 InterPro IPR009028 InterPro IPR011989 InterPro IPR013041 InterPro IPR016024 InterPro IPR017104 Gene Ontology GO:0005488 Gene Ontology GO:0006886 Gene Ontology GO:0008565 Gene Ontology GO:0015031 Gene Ontology GO:0016020 Gene Ontology GO:0016192 Gene Ontology GO:0030117 Gene Ontology GO:0030131 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A1E5UTI0|A0A1E5UTI0_9POAL Human Readable Description: AP-2 complex subunit alpha-2 Pfam IDs Description: PF01602: Adaptin N terminal region; PF02883: Adaptin C-terminal domain; PF02296: Alpha adaptin AP2, C-terminal domain InterPro IDs Description: IPR002553: Clathrin/coatomer adaptor, adaptin-like, N-terminal; IPR003164: Clathrin adaptor, alpha-adaptin, appendage, C-terminal subdomain; IPR008152: Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain; IPR009028: Coatomer/calthrin adaptor appendage, C-terminal subdomain; IPR011989: Armadillo-like helical; IPR013041: Coatomer/clathrin adaptor appendage, Ig-like subdomain; IPR016024: Armadillo-type fold; IPR017104: Adaptor protein complex AP-2, alpha subunit GO IDs Description via InterPro: GO:0005488 MF: binding; GO:0006886 BP: intracellular protein transport; GO:0008565 MF: protein transporter activity; GO:0015031 BP: protein transport; GO:0016020 CC: membrane; GO:0016192 BP: vesicle-mediated transport; GO:0030117 CC: membrane coat; GO:0030131 CC: clathrin adaptor complex
Type	Genomics
Sequence	TraesCS5A01G557300.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring