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GrainGenes Probe Report: TraesCS5A01G483300

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS5A01G483300
Locus	TraesCS5A01G483300.1
URL	[ Hide all but 1 of 19 ] Pfam PF01074 Pfam PF09261 Pfam PF07748 InterPro IPR000602 InterPro IPR011013 InterPro IPR011330 InterPro IPR011682 InterPro IPR015341 InterPro IPR027291 InterPro IPR028995 Gene Ontology GO:0003824 Gene Ontology GO:0004553 Gene Ontology GO:0004559 Gene Ontology GO:0005975 Gene Ontology GO:0006013 Gene Ontology GO:0008270 Gene Ontology GO:0015923 Gene Ontology GO:0030246 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A0Q3ELA1|A0A0Q3ELA1_BRADI Human Readable Description: Alpha-mannosidase Pfam IDs Description: PF01074: Glycosyl hydrolases family 38 N-terminal domain; PF09261: Alpha mannosidase middle domain; PF07748: Glycosyl hydrolases family 38 C-terminal domain InterPro IDs Description: IPR000602: Glycoside hydrolase family 38, N-terminal domain; IPR011013: Galactose mutarotase-like domain; IPR011330: Glycoside hydrolase/deacetylase, beta/alpha-barrel; IPR011682: Glycosyl hydrolase family 38, C-terminal; IPR015341: Glycoside hydrolase family 38, central domain; IPR027291: Glycoside hydrolase 38/57, N-terminal domain; IPR028995: Glycoside hydrolase families 57/38, central domain GO IDs Description via InterPro: GO:0003824 MF: catalytic activity; GO:0004553 MF: hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0004559 MF: alpha-mannosidase activity; GO:0005975 BP: carbohydrate metabolic process; GO:0006013 BP: mannose metabolic process; GO:0008270 MF: zinc ion binding; GO:0015923 MF: mannosidase activity; GO:0030246 MF: carbohydrate binding
Type	Genomics
Sequence	TraesCS5A01G483300.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring