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GrainGenes Probe Report: TraesCS5A01G398300

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS5A01G398300
Locus	TraesCS5A01G398300.1
URL	[ Hide all but 1 of 21 ] Pfam PF01118 Pfam PF02774 InterPro IPR000534 InterPro IPR005986 InterPro IPR012080 InterPro IPR012280 InterPro IPR016040 Gene Ontology GO:0003942 Gene Ontology GO:0004073 Gene Ontology GO:0005737 Gene Ontology GO:0008652 Gene Ontology GO:0009086 Gene Ontology GO:0009088 Gene Ontology GO:0009089 Gene Ontology GO:0009097 Gene Ontology GO:0016620 Gene Ontology GO:0046983 Gene Ontology GO:0050661 Gene Ontology GO:0051287 Gene Ontology GO:0055114 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A0K9NS48|A0A0K9NS48_ZOSMR Human Readable Description: Aspartate-semialdehyde dehydrogenase, N-acetyl-gamma-glutamyl-phosphate reductase Pfam IDs Description: PF01118: Semialdehyde dehydrogenase, NAD binding domain; PF02774: Semialdehyde dehydrogenase, dimerisation domain InterPro IDs Description: IPR000534: Semialdehyde dehydrogenase, NAD-binding; IPR005986: Aspartate-semialdehyde dehydrogenase, beta-type; IPR012080: Aspartate-semialdehyde dehydrogenase; IPR012280: Semialdehyde dehydrogenase, dimerisation domain; IPR016040: NAD(P)-binding domain GO IDs Description via InterPro: GO:0003942 MF: N-acetyl-gamma-glutamyl-phosphate reductase activity; GO:0004073 MF: aspartate-semialdehyde dehydrogenase activity; GO:0005737 CC: cytoplasm; GO:0008652 BP: cellular amino acid biosynthetic process; GO:0009086 BP: methionine biosynthetic process; GO:0009088 BP: threonine biosynthetic process; GO:0009089 BP: lysine biosynthetic process via diaminopimelate; GO:0009097 BP: isoleucine biosynthetic process; GO:0016620 MF: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor; GO:0046983 MF: protein dimerization activity; GO:0050661 MF: NADP binding; GO:0051287 MF: NAD binding; GO:0055114 BP: oxidation-reduction process
Type	Genomics
Sequence	TraesCS5A01G398300.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring