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GrainGenes Probe Report: TraesCS5A01G253000

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS5A01G253000
Locus	TraesCS5A01G253000.1
URL	[ Hide all but 1 of 14 ] Pfam PF01029 Pfam PF01189 InterPro IPR001678 InterPro IPR004573 InterPro IPR006027 InterPro IPR023267 InterPro IPR023268 InterPro IPR029063 Gene Ontology GO:0003723 Gene Ontology GO:0006355 Gene Ontology GO:0006364 Gene Ontology GO:0008168 Gene Ontology GO:0008649 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|M8AM48|M8AM48_TRIUA Human Readable Description: Ribosomal RNA small subunit methyltransferase B Pfam IDs Description: PF01029: NusB family; PF01189: 16S rRNA methyltransferase RsmB/F InterPro IDs Description: IPR001678: SAM-dependent methyltransferase RsmB/NOP2-type; IPR004573: rRNA small subunit methyltransferase B; IPR006027: NusB/RsmB/TIM44; IPR023267: RNA (C5-cytosine) methyltransferase; IPR023268: RNA (C5-cytosine) methyltransferase, putative Rsm-related, plant; IPR029063: S-adenosyl-L-methionine-dependent methyltransferase GO IDs Description via InterPro: GO:0003723 MF: RNA binding; GO:0006355 BP: regulation of transcription, DNA-templated; GO:0006364 BP: rRNA processing; GO:0008168 MF: methyltransferase activity; GO:0008649 MF: rRNA methyltransferase activity
Type	Genomics
Sequence	TraesCS5A01G253000.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring