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GrainGenes Probe Report: TraesCS5A01G132300

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS5A01G132300
Locus	TraesCS5A01G132300.2
URL	[ Hide all but 1 of 18 ] Pfam PF01565 Pfam PF04030 InterPro IPR006094 InterPro IPR007173 InterPro IPR010029 InterPro IPR016166 InterPro IPR016167 InterPro IPR016169 InterPro IPR016170 Gene Ontology GO:0003824 Gene Ontology GO:0003885 Gene Ontology GO:0016020 Gene Ontology GO:0016491 Gene Ontology GO:0016614 Gene Ontology GO:0016633 Gene Ontology GO:0050660 Gene Ontology GO:0055114 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A1B1X3I2|A0A1B1X3I2_WHEAT Human Readable Description: L-galactono-1, 4-lactone dehydrogenase Pfam IDs Description: PF01565: FAD binding domain; PF04030: D-arabinono-1, 4-lactone oxidase InterPro IDs Description: IPR006094: FAD linked oxidase, N-terminal; IPR007173: D-arabinono-1, 4-lactone oxidase; IPR010029: Galactonolactone dehydrogenase; IPR016166: FAD-binding, type 2; IPR016167: FAD-binding, type 2, subdomain 1; IPR016169: CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2; IPR016170: Vanillyl-alcohol oxidase/Cytokinin dehydrogenase C-terminal domain GO IDs Description via InterPro: GO:0003824 MF: catalytic activity; GO:0003885 MF: D-arabinono-1, 4-lactone oxidase activity; GO:0016020 CC: membrane; GO:0016491 MF: oxidoreductase activity; GO:0016614 MF: oxidoreductase activity, acting on CH-OH group of donors; GO:0016633 MF: galactonolactone dehydrogenase activity; GO:0050660 MF: flavin adenine dinucleotide binding; GO:0055114 BP: oxidation-reduction process
Type	Genomics
Sequence	TraesCS5A01G132300.1 TraesCS5A01G132300.2 TraesCS5A01G132300.3
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring