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GrainGenes Probe Report: TraesCS5A01G048100

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS5A01G048100
Locus	TraesCS5A01G048100.1
URL	[ Hide all but 1 of 18 ] Pfam PF00133 Pfam PF08264 InterPro IPR002300 InterPro IPR002303 InterPro IPR009008 InterPro IPR009080 InterPro IPR013155 InterPro IPR014729 InterPro IPR019499 Gene Ontology GO:0000166 Gene Ontology GO:0002161 Gene Ontology GO:0004812 Gene Ontology GO:0004832 Gene Ontology GO:0005524 Gene Ontology GO:0005737 Gene Ontology GO:0006418 Gene Ontology GO:0006438 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A1J3EMC7|A0A1J3EMC7_NOCCA Human Readable Description: Valine--tRNA ligase Pfam IDs Description: PF00133: tRNA synthetases class I (I, L, M and V); PF08264: Anticodon-binding domain of tRNA InterPro IDs Description: IPR002300: Aminoacyl-tRNA synthetase, class Ia; IPR002303: Valine-tRNA ligase; IPR009008: Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain; IPR009080: Aminoacyl-tRNA synthetase, class Ia, anticodon-binding; IPR013155: Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding; IPR014729: Rossmann-like alpha/beta/alpha sandwich fold; IPR019499: Valyl-tRNA synthetase, tRNA-binding arm GO IDs Description via InterPro: GO:0000166 MF: nucleotide binding; GO:0002161 MF: aminoacyl-tRNA editing activity; GO:0004812 MF: aminoacyl-tRNA ligase activity; GO:0004832 MF: valine-tRNA ligase activity; GO:0005524 MF: ATP binding; GO:0005737 CC: cytoplasm; GO:0006418 BP: tRNA aminoacylation for protein translation; GO:0006438 BP: valyl-tRNA aminoacylation
Type	Genomics
Sequence	TraesCS5A01G048100.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring