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GrainGenes Probe Report: TraesCS4D01G284400

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS4D01G284400
Locus	TraesCS4D01G284400.1
URL	[ Hide all but 1 of 13 ] Pfam PF00128 Pfam PF07821 InterPro IPR006046 InterPro IPR006047 InterPro IPR012850 InterPro IPR013775 InterPro IPR017853 Gene Ontology GO:0003824 Gene Ontology GO:0004556 Gene Ontology GO:0005509 Gene Ontology GO:0005975 Gene Ontology GO:0043169 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A1D5XY59|A0A1D5XY59_WHEAT Human Readable Description: Alpha-amylase Pfam IDs Description: PF00128: Alpha amylase, catalytic domain; PF07821: Alpha-amylase C-terminal beta-sheet domain InterPro IDs Description: IPR006046: Alpha amylase; IPR006047: Glycosyl hydrolase, family 13, catalytic domain; IPR012850: Alpha-amylase, C-terminal beta-sheet; IPR013775: Alpha-amylase, plant; IPR017853: Glycoside hydrolase superfamily GO IDs Description via InterPro: GO:0003824 MF: catalytic activity; GO:0004556 MF: alpha-amylase activity; GO:0005509 MF: calcium ion binding; GO:0005975 BP: carbohydrate metabolic process; GO:0043169 MF: cation binding
Type	Genomic
Sequence	TraesCS4D01G284400.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring