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GrainGenes Probe Report: TraesCS4D01G257900

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS4D01G257900
Locus	TraesCS4D01G257900.1
URL	[ Hide all but 1 of 25 ] Pfam PF12515 Pfam PF00690 Pfam PF00122 Pfam PF13246 Pfam PF08282 Pfam PF00689 InterPro IPR001757 InterPro IPR004014 InterPro IPR006068 InterPro IPR006408 InterPro IPR008250 InterPro IPR018303 InterPro IPR023214 InterPro IPR023298 InterPro IPR023299 InterPro IPR024750 Gene Ontology GO:0000166 Gene Ontology GO:0005388 Gene Ontology GO:0005516 Gene Ontology GO:0005524 Gene Ontology GO:0016020 Gene Ontology GO:0016021 Gene Ontology GO:0046872 Gene Ontology GO:0070588 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|M8CBH6|M8CBH6_AEGTA Human Readable Description: Calcium-transporting ATPase Pfam IDs Description: PF12515: Ca2+-ATPase N terminal autoinhibitory domain; PF00690: Cation transporter/ATPase, N-terminus; PF00122: E1-E2 ATPase; PF13246: Cation transport ATPase (P-type); PF08282: haloacid dehalogenase-like hydrolase; PF00689: Cation transporting ATPase, C-terminus InterPro IDs Description: IPR001757: P-type ATPase; IPR004014: Cation-transporting P-type ATPase, N-terminal; IPR006068: Cation-transporting P-type ATPase, C-terminal; IPR006408: P-type ATPase, subfamily IIB; IPR008250: P-type ATPase, A domain; IPR018303: P-type ATPase, phosphorylation site; IPR023214: HAD-like domain; IPR023298: P-type ATPase, transmembrane domain; IPR023299: P-type ATPase, cytoplasmic domain N; IPR024750: Calcium-transporting P-type ATPase, N-terminal autoinhibitory domain GO IDs Description via InterPro: GO:0000166 MF: nucleotide binding; GO:0005388 MF: calcium-transporting ATPase activity; GO:0005516 MF: calmodulin binding; GO:0005524 MF: ATP binding; GO:0016020 CC: membrane; GO:0016021 CC: integral component of membrane; GO:0046872 MF: metal ion binding; GO:0070588 BP: calcium ion transmembrane transport
Type	Genomic
Sequence	TraesCS4D01G257900.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring