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GrainGenes Probe Report: TraesCS4D01G153900

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS4D01G153900
Locus	TraesCS4D01G153900.2
URL	[ Hide all but 1 of 17 ] Pfam PF00919 Pfam PF04055 Pfam PF01938 InterPro IPR002792 InterPro IPR005839 InterPro IPR006638 InterPro IPR007197 InterPro IPR013848 InterPro IPR020612 InterPro IPR023404 Gene Ontology GO:0003824 Gene Ontology GO:0009451 Gene Ontology GO:0016740 Gene Ontology GO:0043412 Gene Ontology GO:0051536 Gene Ontology GO:0051539 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: sp|Q2RZF8|MIAB_SALRD Human Readable Description: tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase Pfam IDs Description: PF00919: Uncharacterized protein family UPF0004; PF04055: Radical SAM superfamily; PF01938: TRAM domain InterPro IDs Description: IPR002792: TRAM domain; IPR005839: Methylthiotransferase; IPR006638: Elongator protein 3/MiaB/NifB; IPR007197: Radical SAM; IPR013848: Methylthiotransferase, N-terminal; IPR020612: Methylthiotransferase, conserved site; IPR023404: Radical SAM, alpha/beta horseshoe GO IDs Description via InterPro: GO:0003824 MF: catalytic activity; GO:0009451 BP: RNA modification; GO:0016740 MF: transferase activity; GO:0043412 BP: macromolecule modification; GO:0051536 MF: iron-sulfur cluster binding; GO:0051539 MF: 4 iron, 4 sulfur cluster binding
Type	Genomic
Sequence	TraesCS4D01G153900.1 TraesCS4D01G153900.2
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring