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GrainGenes Probe Report: TraesCS4D01G147900

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS4D01G147900
Locus	TraesCS4D01G147900.1
URL	[ Hide all but 1 of 20 ] Pfam PF00575 Pfam PF00270 Pfam PF00271 Pfam PF04408 Pfam PF07717 InterPro IPR001650 InterPro IPR002464 InterPro IPR003029 InterPro IPR007502 InterPro IPR011545 InterPro IPR011709 InterPro IPR012340 InterPro IPR014001 InterPro IPR022967 InterPro IPR027417 Gene Ontology GO:0003676 Gene Ontology GO:0004386 Gene Ontology GO:0005524 Gene Ontology GO:0008026 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A0A9PAQ7|A0A0A9PAQ7_ARUDO Human Readable Description: ATP-dependent RNA helicase, putative Pfam IDs Description: PF00575: S1 RNA binding domain; PF00270: DEAD/DEAH box helicase; PF00271: Helicase conserved C-terminal domain; PF04408: Helicase associated domain (HA2); PF07717: Oligonucleotide/oligosaccharide-binding (OB)-fold InterPro IDs Description: IPR001650: Helicase, C-terminal; IPR002464: DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site; IPR003029: S1 domain; IPR007502: Helicase-associated domain; IPR011545: DEAD/DEAH box helicase domain; IPR011709: Domain of unknown function DUF1605; IPR012340: Nucleic acid-binding, OB-fold; IPR014001: Helicase superfamily 1/2, ATP-binding domain; IPR022967: RNA-binding domain, S1; IPR027417: P-loop containing nucleoside triphosphate hydrolase GO IDs Description via InterPro: GO:0003676 MF: nucleic acid binding; GO:0004386 MF: helicase activity; GO:0005524 MF: ATP binding; GO:0008026 MF: ATP-dependent helicase activity
Type	Genomic
Sequence	TraesCS4D01G147900.1 TraesCS4D01G147900.2
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring