Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: TraesCS4D01G144400

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS4D01G144400
Locus	TraesCS4D01G144400.2
URL	[ Hide all but 1 of 15 ] Pfam PF00270 Pfam PF00271 Pfam PF16124 InterPro IPR001650 InterPro IPR002464 InterPro IPR004589 InterPro IPR011545 InterPro IPR014001 InterPro IPR027417 InterPro IPR032284 Gene Ontology GO:0003676 Gene Ontology GO:0005524 Gene Ontology GO:0006310 Gene Ontology GO:0008026 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: sp|Q89AF9|DEAD_BUCBP Human Readable Description: ATP-dependent RNA helicase DeaD Pfam IDs Description: PF00270: DEAD/DEAH box helicase; PF00271: Helicase conserved C-terminal domain; PF16124: RecQ zinc-binding InterPro IDs Description: IPR001650: Helicase, C-terminal; IPR002464: DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site; IPR004589: DNA helicase, ATP-dependent, RecQ type; IPR011545: DEAD/DEAH box helicase domain; IPR014001: Helicase superfamily 1/2, ATP-binding domain; IPR027417: P-loop containing nucleoside triphosphate hydrolase; IPR032284: ATP-dependent DNA helicase RecQ, zinc-binding domain GO IDs Description via InterPro: GO:0003676 MF: nucleic acid binding; GO:0005524 MF: ATP binding; GO:0006310 BP: DNA recombination; GO:0008026 MF: ATP-dependent helicase activity
Type	Genomic
Sequence	TraesCS4D01G144400.1 TraesCS4D01G144400.2
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring