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GrainGenes Probe Report: TraesCS4D01G052200

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS4D01G052200
Locus	TraesCS4D01G052200.1
URL	[ Hide all but 1 of 29 ] Pfam PF08446 Pfam PF01590 Pfam PF00360 Pfam PF00989 Pfam PF00512 Pfam PF02518 InterPro IPR000014 InterPro IPR001294 InterPro IPR003018 InterPro IPR003594 InterPro IPR003661 InterPro IPR005467 InterPro IPR012129 InterPro IPR013515 InterPro IPR013654 InterPro IPR013767 InterPro IPR016132 InterPro IPR029016 Gene Ontology GO:0000155 Gene Ontology GO:0005515 Gene Ontology GO:0006355 Gene Ontology GO:0007165 Gene Ontology GO:0009584 Gene Ontology GO:0009585 Gene Ontology GO:0009881 Gene Ontology GO:0017006 Gene Ontology GO:0018298 Gene Ontology GO:0042803 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A096URM5|A0A096URM5_WHEAT Human Readable Description: Phytochrome Pfam IDs Description: PF08446: PAS fold; PF01590: GAF domain; PF00360: Phytochrome region; PF00989: PAS fold; PF00512: His Kinase A (phospho-acceptor) domain; PF02518: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase InterPro IDs Description: IPR000014: PAS domain; IPR001294: Phytochrome; IPR003018: GAF domain; IPR003594: Histidine kinase-like ATPase, C-terminal domain; IPR003661: Signal transduction histidine kinase, dimerisation/phosphoacceptor domain; IPR005467: Histidine kinase domain; IPR012129: Phytochrome A/B/C/D/E; IPR013515: Phytochrome, central region; IPR013654: PAS fold-2; IPR013767: PAS fold; IPR016132: Phytochrome chromophore attachment domain; IPR029016: GAF domain-like GO IDs Description via InterPro: GO:0000155 MF: phosphorelay sensor kinase activity; GO:0005515 MF: protein binding; GO:0006355 BP: regulation of transcription, DNA-templated; GO:0007165 BP: signal transduction; GO:0009584 BP: detection of visible light; GO:0009585 BP: red, far-red light phototransduction; GO:0009881 MF: photoreceptor activity; GO:0017006 BP: protein-tetrapyrrole linkage; GO:0018298 BP: protein-chromophore linkage; GO:0042803 MF: protein homodimerization activity
Type	Genomic
Sequence	TraesCS4D01G052200.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring