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GrainGenes Probe Report: TraesCS4D01G049900

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS4D01G049900
Locus	TraesCS4D01G049900.1
URL	[ Hide all but 1 of 14 ] Pfam PF00780 Pfam PF10366 Pfam PF00637 Pfam PF10367 InterPro IPR000547 InterPro IPR001180 InterPro IPR011042 InterPro IPR011990 InterPro IPR019452 InterPro IPR019453 Gene Ontology GO:0005515 Gene Ontology GO:0006886 Gene Ontology GO:0016192 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A1E5UPK5|A0A1E5UPK5_9POAL Human Readable Description: Vam6/Vps39-like protein Pfam IDs Description: PF00780: CNH domain; PF10366: Vacuolar sorting protein 39 domain 1; PF00637: Region in Clathrin and VPS; PF10367: Vacuolar sorting protein 39 domain 2 InterPro IDs Description: IPR000547: Clathrin, heavy chain/VPS, 7-fold repeat; IPR001180: Citron homology (CNH) domain; IPR011042: Six-bladed beta-propeller, TolB-like; IPR011990: Tetratricopeptide-like helical domain; IPR019452: Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 1; IPR019453: Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 2 GO IDs Description via InterPro: GO:0005515 MF: protein binding; GO:0006886 BP: intracellular protein transport; GO:0016192 BP: vesicle-mediated transport
Type	Genomic
Sequence	TraesCS4D01G049900.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring