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GrainGenes Probe Report: TraesCS4D01G045800

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS4D01G045800
Locus	TraesCS4D01G045800.1
URL	[ Hide all but 1 of 20 ] Pfam PF00400 Pfam PF04053 Pfam PF06957 InterPro IPR001680 InterPro IPR006692 InterPro IPR010714 InterPro IPR011048 InterPro IPR011990 InterPro IPR015943 InterPro IPR016391 InterPro IPR017986 InterPro IPR019775 InterPro IPR020472 Gene Ontology GO:0005198 Gene Ontology GO:0005515 Gene Ontology GO:0006886 Gene Ontology GO:0016192 Gene Ontology GO:0030117 Gene Ontology GO:0030126 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A1D6DJG7|A0A1D6DJG7_WHEAT Human Readable Description: Coatomer subunit alpha Pfam IDs Description: PF00400: WD domain, G-beta repeat; PF04053: Coatomer WD associated region; PF06957: Coatomer (COPI) alpha subunit C-terminus InterPro IDs Description: IPR001680: WD40 repeat; IPR006692: Coatomer, WD associated region; IPR010714: Coatomer, alpha subunit, C-terminal; IPR011048: Cytochrome cd1-nitrite reductase-like, haem d1 domain; IPR011990: Tetratricopeptide-like helical domain; IPR015943: WD40/YVTN repeat-like-containing domain; IPR016391: Coatomer alpha subunit; IPR017986: WD40-repeat-containing domain; IPR019775: WD40 repeat, conserved site; IPR020472: G-protein beta WD-40 repeat GO IDs Description via InterPro: GO:0005198 MF: structural molecule activity; GO:0005515 MF: protein binding; GO:0006886 BP: intracellular protein transport; GO:0016192 BP: vesicle-mediated transport; GO:0030117 CC: membrane coat; GO:0030126 CC: COPI vesicle coat
Type	Genomic
Sequence	TraesCS4D01G045800.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring