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GrainGenes Probe Report: TraesCS4A01G442600

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS4A01G442600
Locus	TraesCS4A01G442600.1
URL	[ Hide all but 1 of 15 ] Pfam PF02670 Pfam PF08436 Pfam PF13288 InterPro IPR003821 InterPro IPR013512 InterPro IPR013644 InterPro IPR016040 InterPro IPR026877 Gene Ontology GO:0005515 Gene Ontology GO:0008299 Gene Ontology GO:0030604 Gene Ontology GO:0046872 Gene Ontology GO:0055114 Gene Ontology GO:0070402 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|Q9FXZ7|Q9FXZ7_MAIZE Human Readable Description: 1-deoxy-D-xylulose 5-phosphate reductoisomerase Pfam IDs Description: PF02670: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PF08436: 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; PF13288: DXP reductoisomerase C-terminal domain InterPro IDs Description: IPR003821: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; IPR013512: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal; IPR013644: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal; IPR016040: NAD(P)-binding domain; IPR026877: DXP reductoisomerase C-terminal domain GO IDs Description via InterPro: GO:0005515 MF: protein binding; GO:0008299 BP: isoprenoid biosynthetic process; GO:0030604 MF: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity; GO:0046872 MF: metal ion binding; GO:0055114 BP: oxidation-reduction process; GO:0070402 MF: NADPH binding
Type	Genomic
Sequence	TraesCS4A01G442600.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring