Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: TraesCS3A01G360800

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS3A01G360800
Locus	TraesCS3A01G360800.1
URL	[ Hide all but 1 of 17 ] Pfam PF06480 Pfam PF00004 Pfam PF01434 InterPro IPR000642 InterPro IPR003593 InterPro IPR003959 InterPro IPR003960 InterPro IPR005936 InterPro IPR011546 InterPro IPR027417 Gene Ontology GO:0004222 Gene Ontology GO:0005524 Gene Ontology GO:0006508 Gene Ontology GO:0008270 Gene Ontology GO:0016020 Gene Ontology GO:0016021 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A0K9PCT4|A0A0K9PCT4_ZOSMR Human Readable Description: ATP-dependent zinc metalloprotease FtsH Pfam IDs Description: PF06480: FtsH Extracellular; PF00004: ATPase family associated with various cellular activities (AAA); PF01434: Peptidase family M41 InterPro IDs Description: IPR000642: Peptidase M41; IPR003593: AAA+ ATPase domain; IPR003959: ATPase, AAA-type, core; IPR003960: ATPase, AAA-type, conserved site; IPR005936: Peptidase, FtsH; IPR011546: Peptidase M41, FtsH extracellular; IPR027417: P-loop containing nucleoside triphosphate hydrolase GO IDs Description via InterPro: GO:0004222 MF: metalloendopeptidase activity; GO:0005524 MF: ATP binding; GO:0006508 BP: proteolysis; GO:0008270 MF: zinc ion binding; GO:0016020 CC: membrane; GO:0016021 CC: integral component of membrane
Type	Genomic
Sequence	TraesCS3A01G360800.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring