Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: TraesCS3A01G154900

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS3A01G154900
Locus	TraesCS3A01G154900.1
URL	[ Hide all but 1 of 15 ] Pfam PF04564 Pfam PF00400 InterPro IPR001680 InterPro IPR003613 InterPro IPR011989 InterPro IPR013083 InterPro IPR015943 InterPro IPR016024 InterPro IPR017986 InterPro IPR019775 Gene Ontology GO:0004842 Gene Ontology GO:0005488 Gene Ontology GO:0005515 Gene Ontology GO:0016567 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A061GNL9|A0A061GNL9_THECC Human Readable Description: Transducin/WD40 repeat-like superfamily protein Pfam IDs Description: PF04564: U-box domain; PF00400: WD domain, G-beta repeat InterPro IDs Description: IPR001680: WD40 repeat; IPR003613: U box domain; IPR011989: Armadillo-like helical; IPR013083: Zinc finger, RING/FYVE/PHD-type; IPR015943: WD40/YVTN repeat-like-containing domain; IPR016024: Armadillo-type fold; IPR017986: WD40-repeat-containing domain; IPR019775: WD40 repeat, conserved site GO IDs Description via InterPro: GO:0004842 MF: ubiquitin-protein transferase activity; GO:0005488 MF: binding; GO:0005515 MF: protein binding; GO:0016567 BP: protein ubiquitination
Type	Genomic
Sequence	TraesCS3A01G154900.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring