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GrainGenes Probe Report: TraesCS3A01G069900

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS3A01G069900
Locus	TraesCS3A01G069900.2
URL	[ Hide all but 1 of 22 ] Pfam PF00176 Pfam PF00271 Pfam PF09110 Pfam PF09111 InterPro IPR000330 InterPro IPR001005 InterPro IPR001650 InterPro IPR009057 InterPro IPR014001 InterPro IPR015194 InterPro IPR015195 InterPro IPR017884 InterPro IPR027417 Gene Ontology GO:0003676 Gene Ontology GO:0003677 Gene Ontology GO:0005524 Gene Ontology GO:0005634 Gene Ontology GO:0006338 Gene Ontology GO:0016818 Gene Ontology GO:0031491 Gene Ontology GO:0043044 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|B9RT10|B9RT10_RICCO Human Readable Description: Helicase, putative Pfam IDs Description: PF00176: SNF2 family N-terminal domain; PF00271: Helicase conserved C-terminal domain; PF09110: HAND; PF09111: SLIDE InterPro IDs Description: IPR000330: SNF2-related, N-terminal domain; IPR001005: SANT/Myb domain; IPR001650: Helicase, C-terminal; IPR009057: Homeobox domain-like; IPR014001: Helicase superfamily 1/2, ATP-binding domain; IPR015194: ISWI, HAND domain; IPR015195: SLIDE domain; IPR017884: SANT domain; IPR027417: P-loop containing nucleoside triphosphate hydrolase GO IDs Description via InterPro: GO:0003676 MF: nucleic acid binding; GO:0003677 MF: DNA binding; GO:0005524 MF: ATP binding; GO:0005634 CC: nucleus; GO:0006338 BP: chromatin remodeling; GO:0016818 MF: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; GO:0031491 MF: nucleosome binding; GO:0043044 BP: ATP-dependent chromatin remodeling
Type	Genomic
Sequence	TraesCS3A01G069900.1 TraesCS3A01G069900.2 TraesCS3A01G069900.3
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring