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GrainGenes Probe Report: TraesCS2D01G571500

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS2D01G571500
Locus	TraesCS2D01G571500.1
URL	[ Hide all but 1 of 22 ] Pfam PF04997 Pfam PF00623 Pfam PF04983 Pfam PF05000 Pfam PF04998 Pfam PF04992 Pfam PF04990 InterPro IPR000684 InterPro IPR000722 InterPro IPR006592 InterPro IPR007066 InterPro IPR007073 InterPro IPR007075 InterPro IPR007080 InterPro IPR007081 InterPro IPR007083 Gene Ontology GO:0003677 Gene Ontology GO:0003899 Gene Ontology GO:0005665 Gene Ontology GO:0006351 Gene Ontology GO:0006366 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A1D5UM94|A0A1D5UM94_WHEAT Human Readable Description: DNA-directed RNA polymerase subunit Pfam IDs Description: PF04997: RNA polymerase Rpb1, domain 1; PF00623: RNA polymerase Rpb1, domain 2; PF04983: RNA polymerase Rpb1, domain 3; PF05000: RNA polymerase Rpb1, domain 4; PF04998: RNA polymerase Rpb1, domain 5; PF04992: RNA polymerase Rpb1, domain 6; PF04990: RNA polymerase Rpb1, domain 7 InterPro IDs Description: IPR000684: RNA polymerase II, heptapeptide repeat, eukaryotic; IPR000722: RNA polymerase, alpha subunit; IPR006592: RNA polymerase, N-terminal; IPR007066: RNA polymerase Rpb1, domain 3; IPR007073: RNA polymerase Rpb1, domain 7; IPR007075: RNA polymerase Rpb1, domain 6; IPR007080: RNA polymerase Rpb1, domain 1; IPR007081: RNA polymerase Rpb1, domain 5; IPR007083: RNA polymerase Rpb1, domain 4 GO IDs Description via InterPro: GO:0003677 MF: DNA binding; GO:0003899 MF: DNA-directed 5'-3' RNA polymerase activity; GO:0005665 CC: DNA-directed RNA polymerase II, core complex; GO:0006351 BP: transcription, DNA-templated; GO:0006366 BP: transcription from RNA polymerase II promoter
Type	Genomic
Sequence	TraesCS2D01G571500.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring