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GrainGenes Probe Report: TraesCS2D01G562000

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
TraesCS2D01G562000
Locus
TraesCS2D01G562000.3
URL
[ Hide all but 1 of 12 ]
Pfam PF00009
Pfam PF03143
InterPro IPR000795
InterPro IPR001876
InterPro IPR004160
InterPro IPR009000
InterPro IPR009001
InterPro IPR027417
Gene Ontology GO:0003924
Gene Ontology GO:0005525
Gene Ontology GO:0008270
Gene expression at wheat-expression.com (expVIP)
Reference
ReferenceIWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks
BLAST Hit Accession: tr|A0A1J6J688|A0A1J6J688_NICAT
Human Readable Description: Elongation factor 1-alpha
Pfam IDs Description: PF00009: Elongation factor Tu GTP binding domain; PF03143: Elongation factor Tu C-terminal domain
InterPro IDs Description: IPR000795: Transcription factor, GTP-binding domain; IPR001876: Zinc finger, RanBP2-type; IPR004160: Translation elongation factor EFTu/EF1A, C-terminal; IPR009000: Translation protein, beta-barrel domain; IPR009001: Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal; IPR027417: P-loop containing nucleoside triphosphate hydrolase
GO IDs Description via InterPro: GO:0003924 MF: GTPase activity; GO:0005525 MF: GTP binding; GO:0008270 MF: zinc ion binding
Type
Genomic
Sequence
TraesCS2D01G562000.1
TraesCS2D01G562000.2
TraesCS2D01G562000.3
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring