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GrainGenes Probe Report: TraesCS2D01G557000

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
TraesCS2D01G557000
Locus
TraesCS2D01G557000.1
URL
[ Hide all but 1 of 15 ]
Pfam PF00163
Pfam PF01479
Pfam PF02992
InterPro IPR001912
InterPro IPR002942
InterPro IPR004242
InterPro IPR005709
InterPro IPR018079
Gene Ontology GO:0003723
Gene Ontology GO:0003735
Gene Ontology GO:0005622
Gene Ontology GO:0006412
Gene Ontology GO:0015935
Gene Ontology GO:0019843
Gene expression at wheat-expression.com (expVIP)
Reference
ReferenceIWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks
BLAST Hit Accession: tr|S4Z0E5|S4Z0E5_HORVV
Human Readable Description: 30S ribosomal protein S4, chloroplastic
Pfam IDs Description: PF00163: Ribosomal protein S4/S9 N-terminal domain; PF01479: S4 domain; PF02992: Transposase family tnp2
InterPro IDs Description: IPR001912: Ribosomal protein S4/S9, N-terminal; IPR002942: RNA-binding S4 domain; IPR004242: Transposon, En/Spm-like; IPR005709: Ribosomal protein S4, bacterial-type; IPR018079: Ribosomal protein S4, conserved site
GO IDs Description via InterPro: GO:0003723 MF: RNA binding; GO:0003735 MF: structural constituent of ribosome; GO:0005622 CC: intracellular; GO:0006412 BP: translation; GO:0015935 CC: small ribosomal subunit; GO:0019843 MF: rRNA binding
Type
Genomic
Sequence
TraesCS2D01G557000.1
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring