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GrainGenes Probe Report: TraesCS2D01G520000

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
TraesCS2D01G520000
Locus
TraesCS2D01G520000.1
URL
[ Hide all but 1 of 17 ]
Pfam PF00186
Pfam PF00303
InterPro IPR000398
InterPro IPR001796
InterPro IPR012262
InterPro IPR017925
InterPro IPR020940
InterPro IPR023451
InterPro IPR024072
Gene Ontology GO:0004146
Gene Ontology GO:0004799
Gene Ontology GO:0006231
Gene Ontology GO:0006545
Gene Ontology GO:0006730
Gene Ontology GO:0009165
Gene Ontology GO:0055114
Gene expression at wheat-expression.com (expVIP)
Reference
ReferenceIWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks
BLAST Hit Accession: tr|A0A059LGJ3|A0A059LGJ3_9CHLO
Human Readable Description: Thymidylate synthase
Pfam IDs Description: PF00186: Dihydrofolate reductase; PF00303: Thymidylate synthase
InterPro IDs Description: IPR000398: Thymidylate synthase; IPR001796: Dihydrofolate reductase domain; IPR012262: Bifunctional dihydrofolate reductase/thymidylate synthase; IPR017925: Dihydrofolate reductase conserved site; IPR020940: Thymidylate synthase, active site; IPR023451: Thymidylate synthase/dCMP hydroxymethylase domain; IPR024072: Dihydrofolate reductase-like domain
GO IDs Description via InterPro: GO:0004146 MF: dihydrofolate reductase activity; GO:0004799 MF: thymidylate synthase activity; GO:0006231 BP: dTMP biosynthetic process; GO:0006545 BP: glycine biosynthetic process; GO:0006730 BP: one-carbon metabolic process; GO:0009165 BP: nucleotide biosynthetic process; GO:0055114 BP: oxidation-reduction process
Type
Genomic
Sequence
TraesCS2D01G520000.1
TraesCS2D01G520000.2
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring