Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: TraesCS2D01G479100

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS2D01G479100
Locus	TraesCS2D01G479100.1
URL	[ Hide all but 1 of 14 ] Pfam PF00176 Pfam PF14634 Pfam PF00271 InterPro IPR000330 InterPro IPR001650 InterPro IPR001841 InterPro IPR013083 InterPro IPR014001 InterPro IPR017907 InterPro IPR027417 Gene Ontology GO:0005515 Gene Ontology GO:0005524 Gene Ontology GO:0008270 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: AT1G50410.3 Human Readable Description: SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein Pfam IDs Description: PF00176: SNF2 family N-terminal domain; PF14634: zinc-RING finger domain; PF00271: Helicase conserved C-terminal domain InterPro IDs Description: IPR000330: SNF2-related, N-terminal domain; IPR001650: Helicase, C-terminal; IPR001841: Zinc finger, RING-type; IPR013083: Zinc finger, RING/FYVE/PHD-type; IPR014001: Helicase superfamily 1/2, ATP-binding domain; IPR017907: Zinc finger, RING-type, conserved site; IPR027417: P-loop containing nucleoside triphosphate hydrolase GO IDs Description via InterPro: GO:0005515 MF: protein binding; GO:0005524 MF: ATP binding; GO:0008270 MF: zinc ion binding
Type	Genomic
Sequence	TraesCS2D01G479100.1 TraesCS2D01G479100.2
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring