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GrainGenes Probe Report: TraesCS2D01G442000

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS2D01G442000
Locus	TraesCS2D01G442000.1
URL	[ Hide all but 1 of 23 ] Pfam PF13947 Pfam PF08488 Pfam PF00069 InterPro IPR000152 InterPro IPR000719 InterPro IPR000742 InterPro IPR001881 InterPro IPR008271 InterPro IPR011009 InterPro IPR013320 InterPro IPR013695 InterPro IPR017441 InterPro IPR018097 InterPro IPR025287 Gene Ontology GO:0004672 Gene Ontology GO:0004674 Gene Ontology GO:0005509 Gene Ontology GO:0005515 Gene Ontology GO:0005524 Gene Ontology GO:0006468 Gene Ontology GO:0016021 Gene Ontology GO:0030247 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: sp|P93194|RPK1_IPONI Human Readable Description: Receptor-like protein kinase Pfam IDs Description: PF13947: Wall-associated receptor kinase galacturonan-binding; PF08488: Wall-associated kinase; PF00069: Protein kinase domain InterPro IDs Description: IPR000152: EGF-type aspartate/asparagine hydroxylation site; IPR000719: Protein kinase domain; IPR000742: EGF-like domain; IPR001881: EGF-like calcium-binding domain; IPR008271: Serine/threonine-protein kinase, active site; IPR011009: Protein kinase-like domain; IPR013320: Concanavalin A-like lectin/glucanase domain; IPR013695: Wall-associated receptor kinase; IPR017441: Protein kinase, ATP binding site; IPR018097: EGF-like calcium-binding, conserved site; IPR025287: Wall-associated receptor kinase, galacturonan-binding domain GO IDs Description via InterPro: GO:0004672 MF: protein kinase activity; GO:0004674 MF: protein serine/threonine kinase activity; GO:0005509 MF: calcium ion binding; GO:0005515 MF: protein binding; GO:0005524 MF: ATP binding; GO:0006468 BP: protein phosphorylation; GO:0016021 CC: integral component of membrane; GO:0030247 MF: polysaccharide binding
Type	Genomic
Sequence	TraesCS2D01G442000.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring