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GrainGenes Probe Report: TraesCS2D01G407800

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS2D01G407800
Locus	TraesCS2D01G407800.5
URL	[ Hide all but 1 of 21 ] Pfam PF00403 Pfam PF00122 Pfam PF00702 InterPro IPR001757 InterPro IPR006121 InterPro IPR006122 InterPro IPR008250 InterPro IPR017969 InterPro IPR018303 InterPro IPR023214 InterPro IPR023298 InterPro IPR023299 InterPro IPR027256 Gene Ontology GO:0000166 Gene Ontology GO:0005507 Gene Ontology GO:0006812 Gene Ontology GO:0016021 Gene Ontology GO:0019829 Gene Ontology GO:0030001 Gene Ontology GO:0046872 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: sp|P38995|ATU2_YEAST Human Readable Description: Copper-transporting ATPase Pfam IDs Description: PF00403: Heavy-metal-associated domain; PF00122: E1-E2 ATPase; PF00702: haloacid dehalogenase-like hydrolase InterPro IDs Description: IPR001757: P-type ATPase; IPR006121: Heavy metal-associated domain, HMA; IPR006122: Heavy metal-associated domain, copper ion-binding; IPR008250: P-type ATPase, A domain; IPR017969: Heavy-metal-associated, conserved site; IPR018303: P-type ATPase, phosphorylation site; IPR023214: HAD-like domain; IPR023298: P-type ATPase, transmembrane domain; IPR023299: P-type ATPase, cytoplasmic domain N; IPR027256: P-type ATPase, subfamily IB GO IDs Description via InterPro: GO:0000166 MF: nucleotide binding; GO:0005507 MF: copper ion binding; GO:0006812 BP: cation transport; GO:0016021 CC: integral component of membrane; GO:0019829 MF: cation-transporting ATPase activity; GO:0030001 BP: metal ion transport; GO:0046872 MF: metal ion binding
Type	Genomic
Sequence	TraesCS2D01G407800.1 TraesCS2D01G407800.2 TraesCS2D01G407800.3 TraesCS2D01G407800.4 TraesCS2D01G407800.5
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring