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GrainGenes Probe Report: TraesCS2D01G248700

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS2D01G248700
Locus	TraesCS2D01G248700.2
URL	[ Hide all but 1 of 29 ] Pfam PF00111 Pfam PF01799 Pfam PF00941 Pfam PF03450 Pfam PF01315 Pfam PF02738 InterPro IPR000674 InterPro IPR001041 InterPro IPR002346 InterPro IPR002888 InterPro IPR005107 InterPro IPR006058 InterPro IPR008274 InterPro IPR012675 InterPro IPR016166 InterPro IPR016167 InterPro IPR016169 InterPro IPR016208 Gene Ontology GO:0003824 Gene Ontology GO:0005506 Gene Ontology GO:0009055 Gene Ontology GO:0016491 Gene Ontology GO:0016614 Gene Ontology GO:0046872 Gene Ontology GO:0050660 Gene Ontology GO:0051536 Gene Ontology GO:0051537 Gene Ontology GO:0055114 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|B9RQ25|B9RQ25_RICCO Human Readable Description: Aldehyde oxidase, putative Pfam IDs Description: PF00111: 2Fe-2S iron-sulfur cluster binding domain; PF01799: [2Fe-2S] binding domain; PF00941: FAD binding domain in molybdopterin dehydrogenase; PF03450: CO dehydrogenase flavoprotein C-terminal domain; PF01315: Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; PF02738: Molybdopterin-binding domain of aldehyde dehydrogenase InterPro IDs Description: IPR000674: Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; IPR001041: 2Fe-2S ferredoxin-type iron-sulfur binding domain; IPR002346: Molybdopterin dehydrogenase, FAD-binding; IPR002888: [2Fe-2S]-binding; IPR005107: CO dehydrogenase flavoprotein, C-terminal; IPR006058: 2Fe-2S ferredoxin, iron-sulphur binding site; IPR008274: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; IPR012675: Beta-grasp domain; IPR016166: FAD-binding, type 2; IPR016167: FAD-binding, type 2, subdomain 1; IPR016169: CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2; IPR016208: Aldehyde oxidase/xanthine dehydrogenase GO IDs Description via InterPro: GO:0003824 MF: catalytic activity; GO:0005506 MF: iron ion binding; GO:0009055 MF: electron carrier activity; GO:0016491 MF: oxidoreductase activity; GO:0016614 MF: oxidoreductase activity, acting on CH-OH group of donors; GO:0046872 MF: metal ion binding; GO:0050660 MF: flavin adenine dinucleotide binding; GO:0051536 MF: iron-sulfur cluster binding; GO:0051537 MF: 2 iron, 2 sulfur cluster binding; GO:0055114 BP: oxidation-reduction process
Type	Genomic
Sequence	TraesCS2D01G248700.1 TraesCS2D01G248700.2 TraesCS2D01G248700.3
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring