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GrainGenes Probe Report: TraesCS2D01G246100

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS2D01G246100
Locus	TraesCS2D01G246100.1
URL	[ Hide all but 1 of 22 ] Pfam PF01138 Pfam PF03725 Pfam PF00013 Pfam PF00575 InterPro IPR001247 InterPro IPR003029 InterPro IPR004087 InterPro IPR004088 InterPro IPR012162 InterPro IPR012340 InterPro IPR015847 InterPro IPR015848 InterPro IPR020568 InterPro IPR022967 InterPro IPR027408 Gene Ontology GO:0000175 Gene Ontology GO:0003676 Gene Ontology GO:0003723 Gene Ontology GO:0004654 Gene Ontology GO:0006396 Gene Ontology GO:0006402 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|B9SI65|B9SI65_RICCO Human Readable Description: Polyribonucleotide nucleotidyltransferase, putative Pfam IDs Description: PF01138: 3' exoribonuclease family, domain 1; PF03725: 3' exoribonuclease family, domain 2; PF00013: KH domain; PF00575: S1 RNA binding domain InterPro IDs Description: IPR001247: Exoribonuclease, phosphorolytic domain 1; IPR003029: S1 domain; IPR004087: K Homology domain; IPR004088: K Homology domain, type 1; IPR012162: Polyribonucleotide nucleotidyltransferase; IPR012340: Nucleic acid-binding, OB-fold; IPR015847: Exoribonuclease, phosphorolytic domain 2; IPR015848: Polyribonucleotide nucleotidyltransferase, RNA-binding domain; IPR020568: Ribosomal protein S5 domain 2-type fold; IPR022967: RNA-binding domain, S1; IPR027408: PNPase/RNase PH domain GO IDs Description via InterPro: GO:0000175 MF: 3'-5'-exoribonuclease activity; GO:0003676 MF: nucleic acid binding; GO:0003723 MF: RNA binding; GO:0004654 MF: polyribonucleotide nucleotidyltransferase activity; GO:0006396 BP: RNA processing; GO:0006402 BP: mRNA catabolic process
Type	Genomic
Sequence	TraesCS2D01G246100.1 TraesCS2D01G246100.2 TraesCS2D01G246100.3
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring