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GrainGenes Probe Report: TraesCS2D01G094000

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS2D01G094000
Locus	TraesCS2D01G094000.1
URL	[ Hide all but 1 of 20 ] Pfam PF02190 Pfam PF00004 Pfam PF05362 InterPro IPR003111 InterPro IPR003593 InterPro IPR003959 InterPro IPR004815 InterPro IPR008268 InterPro IPR008269 InterPro IPR014721 InterPro IPR015947 InterPro IPR020568 InterPro IPR027417 InterPro IPR027503 Gene Ontology GO:0004176 Gene Ontology GO:0004252 Gene Ontology GO:0005524 Gene Ontology GO:0006508 Gene Ontology GO:0006515 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A9REQ0|A9REQ0_PHYPA Human Readable Description: Lon protease homolog Pfam IDs Description: PF02190: ATP-dependent protease La (LON) substrate-binding domain; PF00004: ATPase family associated with various cellular activities (AAA); PF05362: Lon protease (S16) C-terminal proteolytic domain InterPro IDs Description: IPR003111: Lon, substrate-binding domain; IPR003593: AAA+ ATPase domain; IPR003959: ATPase, AAA-type, core; IPR004815: Lon protease, bacterial/eukaryotic-type; IPR008268: Peptidase S16, active site; IPR008269: Peptidase S16, Lon proteolytic domain; IPR014721: Ribosomal protein S5 domain 2-type fold, subgroup; IPR015947: PUA-like domain; IPR020568: Ribosomal protein S5 domain 2-type fold; IPR027417: P-loop containing nucleoside triphosphate hydrolase; IPR027503: Lon protease homolog, chloroplastic/mitochondrial GO IDs Description via InterPro: GO:0004176 MF: ATP-dependent peptidase activity; GO:0004252 MF: serine-type endopeptidase activity; GO:0005524 MF: ATP binding; GO:0006508 BP: proteolysis; GO:0006515 BP: misfolded or incompletely synthesized protein catabolic process
Type	Genomic
Sequence	TraesCS2D01G094000.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring