Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: TraesCS2D01G091400

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS2D01G091400
Locus	TraesCS2D01G091400.2
URL	[ Hide all but 1 of 13 ] Pfam PF01820 Pfam PF07478 InterPro IPR000291 InterPro IPR011095 InterPro IPR011127 InterPro IPR011761 InterPro IPR013815 InterPro IPR016185 Gene Ontology GO:0003824 Gene Ontology GO:0005524 Gene Ontology GO:0008716 Gene Ontology GO:0046872 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|M7ZUU8|M7ZUU8_TRIUA Human Readable Description: D-alanine--D-alanine ligase Pfam IDs Description: PF01820: D-ala D-ala ligase N-terminus; PF07478: D-ala D-ala ligase C-terminus InterPro IDs Description: IPR000291: D-alanine--D-alanine ligase/VANA/B/C, conserved site; IPR011095: D-alanine--D-alanine ligase, C-terminal; IPR011127: D-alanine--D-alanine ligase, N-terminal domain; IPR011761: ATP-grasp fold; IPR013815: ATP-grasp fold, subdomain 1; IPR016185: Pre-ATP-grasp domain GO IDs Description via InterPro: GO:0003824 MF: catalytic activity; GO:0005524 MF: ATP binding; GO:0008716 MF: D-alanine-D-alanine ligase activity; GO:0046872 MF: metal ion binding
Type	Genomic
Sequence	TraesCS2D01G091400.1 TraesCS2D01G091400.2
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring