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GrainGenes Probe Report: TraesCS2B01G626400

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS2B01G626400
Locus	TraesCS2B01G626400.2
URL	[ Hide all but 1 of 15 ] Pfam PF13292 Pfam PF02779 Pfam PF02780 InterPro IPR005474 InterPro IPR005475 InterPro IPR005477 InterPro IPR009014 InterPro IPR020826 InterPro IPR029061 InterPro IPR033248 Gene Ontology GO:0003824 Gene Ontology GO:0008152 Gene Ontology GO:0008661 Gene Ontology GO:0016114 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A4ZYX4|A4ZYX4_MAIZE Human Readable Description: 1-deoxy-D-xylulose 5-phosphate synthase Pfam IDs Description: PF13292: 1-deoxy-D-xylulose-5-phosphate synthase; PF02779: Transketolase, pyrimidine binding domain; PF02780: Transketolase, C-terminal domain InterPro IDs Description: IPR005474: Transketolase, N-terminal; IPR005475: Transketolase-like, pyrimidine-binding domain; IPR005477: Deoxyxylulose-5-phosphate synthase; IPR009014: Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II; IPR020826: Transketolase binding site; IPR029061: Thiamin diphosphate-binding fold; IPR033248: Transketolase, C-terminal domain GO IDs Description via InterPro: GO:0003824 MF: catalytic activity; GO:0008152 BP: metabolic process; GO:0008661 MF: 1-deoxy-D-xylulose-5-phosphate synthase activity; GO:0016114 BP: terpenoid biosynthetic process
Type	Genomic
Sequence	TraesCS2B01G626400.1 TraesCS2B01G626400.2
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring